Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.59■□□□□ 0.41
Sox5P35710 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sox5P35710 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.59■□□□□ 0.41
Sox5P35710 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.59■□□□□ 0.41
Sox5P35710 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sox5P35710 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.59■□□□□ 0.41
Sox5P35710 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sox5P35710 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.59■□□□□ 0.41
Sox5P35710 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sox5P35710 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox5P35710 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Sox5P35710 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox5P35710 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.58■□□□□ 0.41
Sox5P35710 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox5P35710 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox5P35710 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sox5P35710 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sox5P35710 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.58■□□□□ 0.41
Sox5P35710 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.58■□□□□ 0.41
Sox5P35710 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.58■□□□□ 0.41
Sox5P35710 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.58■□□□□ 0.4
Sox5P35710 Gm13436-201ENSMUST00000120418 567 ntBASIC17.58■□□□□ 0.4
Sox5P35710 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.58■□□□□ 0.4
Sox5P35710 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Sox5P35710 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sox5P35710 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Sox5P35710 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.57■□□□□ 0.4
Sox5P35710 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sox5P35710 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.57■□□□□ 0.4
Sox5P35710 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.57■□□□□ 0.4
Sox5P35710 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Sox5P35710 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sox5P35710 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Sox5P35710 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Sox5P35710 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Sox5P35710 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Sox5P35710 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.56■□□□□ 0.4
Sox5P35710 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sox5P35710 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox5P35710 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox5P35710 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox5P35710 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox5P35710 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sox5P35710 Gm26039-201ENSMUST00000158152 144 ntBASIC17.55■□□□□ 0.4
Sox5P35710 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox5P35710 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.55■□□□□ 0.4
Sox5P35710 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sox5P35710 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sox5P35710 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Sox5P35710 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.55■□□□□ 0.4
Sox5P35710 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sox5P35710 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms