Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cd40lgP27548 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cd40lgP27548 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.85□□□□□ -0.03
Cd40lgP27548 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.85□□□□□ -0.03
Cd40lgP27548 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Cd40lgP27548 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cd40lgP27548 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Cd40lgP27548 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cd40lgP27548 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Cd40lgP27548 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Cd40lgP27548 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cd40lgP27548 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.84□□□□□ -0.03
Cd40lgP27548 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.84□□□□□ -0.03
Cd40lgP27548 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cd40lgP27548 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cd40lgP27548 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.84□□□□□ -0.03
Cd40lgP27548 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd40lgP27548 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cd40lgP27548 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd40lgP27548 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd40lgP27548 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cd40lgP27548 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.83□□□□□ -0.04
Cd40lgP27548 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.83□□□□□ -0.04
Cd40lgP27548 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.83□□□□□ -0.04
Cd40lgP27548 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.83□□□□□ -0.04
Cd40lgP27548 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Cd40lgP27548 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cd40lgP27548 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cd40lgP27548 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cd40lgP27548 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Cd40lgP27548 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.82□□□□□ -0.04
Cd40lgP27548 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.82□□□□□ -0.04
Cd40lgP27548 Gm44450-201ENSMUST00000199528 114 ntBASIC14.82□□□□□ -0.04
Cd40lgP27548 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.82□□□□□ -0.04
Cd40lgP27548 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.82□□□□□ -0.04
Cd40lgP27548 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.82□□□□□ -0.04
Cd40lgP27548 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cd40lgP27548 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cd40lgP27548 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cd40lgP27548 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cd40lgP27548 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms