Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccl3P10855 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ccl3P10855 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Gm8344-201ENSMUST00000119813 856 ntBASIC14.18□□□□□ -0.14
Ccl3P10855 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccl3P10855 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.18□□□□□ -0.14
Ccl3P10855 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ccl3P10855 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccl3P10855 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ccl3P10855 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl3P10855 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ccl3P10855 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.17□□□□□ -0.14
Ccl3P10855 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccl3P10855 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.17□□□□□ -0.14
Ccl3P10855 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccl3P10855 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccl3P10855 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccl3P10855 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccl3P10855 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.17□□□□□ -0.14
Ccl3P10855 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccl3P10855 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccl3P10855 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Ccl3P10855 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ccl3P10855 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ccl3P10855 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccl3P10855 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.16□□□□□ -0.14
Ccl3P10855 Gm4899-201ENSMUST00000178708 719 ntBASIC14.16□□□□□ -0.14
Ccl3P10855 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.16□□□□□ -0.14
Ccl3P10855 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.16□□□□□ -0.14
Ccl3P10855 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccl3P10855 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccl3P10855 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Ccl3P10855 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccl3P10855 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccl3P10855 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Ccl3P10855 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ccl3P10855 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Ccl3P10855 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.15□□□□□ -0.14
Ccl3P10855 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccl3P10855 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccl3P10855 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccl3P10855 Gm27300-201ENSMUST00000184085 97 ntBASIC14.15□□□□□ -0.14
Ccl3P10855 Gm27335-201ENSMUST00000184758 97 ntBASIC14.15□□□□□ -0.14
Ccl3P10855 Gm10576-201ENSMUST00000191927 825 ntBASIC14.15□□□□□ -0.14
Ccl3P10855 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccl3P10855 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms