Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl1P10146 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl1P10146 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl1P10146 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl1P10146 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ccl1P10146 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccl1P10146 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl1P10146 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl1P10146 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.54□□□□□ -0.4
Ccl1P10146 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl1P10146 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccl1P10146 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.54□□□□□ -0.4
Ccl1P10146 Rab3c-203ENSMUST00000224180 967 ntBASIC12.54□□□□□ -0.4
Ccl1P10146 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.54□□□□□ -0.4
Ccl1P10146 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl1P10146 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl1P10146 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl1P10146 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccl1P10146 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Ccl1P10146 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccl1P10146 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccl1P10146 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.53□□□□□ -0.4
Ccl1P10146 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.53□□□□□ -0.4
Ccl1P10146 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.53□□□□□ -0.4
Ccl1P10146 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccl1P10146 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccl1P10146 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccl1P10146 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl1P10146 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ccl1P10146 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl1P10146 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccl1P10146 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ccl1P10146 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl1P10146 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ccl1P10146 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ccl1P10146 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccl1P10146 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl1P10146 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl1P10146 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccl1P10146 Gm24841-201ENSMUST00000158676 357 ntBASIC12.52□□□□□ -0.41
Ccl1P10146 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl1P10146 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl1P10146 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl1P10146 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl1P10146 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl1P10146 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl1P10146 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl1P10146 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl1P10146 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl1P10146 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ccl1P10146 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccl1P10146 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ccl1P10146 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccl1P10146 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl1P10146 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl1P10146 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl1P10146 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl1P10146 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl1P10146 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl1P10146 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccl1P10146 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl1P10146 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Ccl1P10146 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccl1P10146 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl1P10146 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ccl1P10146 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl1P10146 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Ccl1P10146 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccl1P10146 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms