Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.05□□□□□ -0.32
P04940 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
P04940 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.05□□□□□ -0.32
P04940 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P04940 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.05□□□□□ -0.32
P04940 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
P04940 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
P04940 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04940 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
P04940 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.04□□□□□ -0.32
P04940 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.04□□□□□ -0.32
P04940 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
P04940 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.04□□□□□ -0.32
P04940 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04940 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
P04940 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
P04940 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.03□□□□□ -0.32
P04940 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.03□□□□□ -0.32
P04940 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.03□□□□□ -0.32
P04940 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
P04940 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
P04940 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P04940 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
P04940 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.02□□□□□ -0.32
P04940 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
P04940 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
P04940 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04940 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P04940 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.02□□□□□ -0.33
P04940 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
P04940 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.02□□□□□ -0.33
P04940 Gm27742-201ENSMUST00000184667 60 ntBASIC13.02□□□□□ -0.33
P04940 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.02□□□□□ -0.33
P04940 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04940 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04940 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04940 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04940 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P04940 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
P04940 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04940 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04940 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
P04940 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04940 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04940 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04940 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.01□□□□□ -0.33
P04940 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
P04940 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P04940 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04940 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P04940 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.01□□□□□ -0.33
P04940 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms