Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.64■□□□□ 0.74
Col4a1P02463 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Col4a1P02463 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a1P02463 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a1P02463 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a1P02463 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a1P02463 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.64■□□□□ 0.73
Col4a1P02463 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.64■□□□□ 0.73
Col4a1P02463 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a1P02463 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Col4a1P02463 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a1P02463 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Col4a1P02463 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a1P02463 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a1P02463 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a1P02463 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a1P02463 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a1P02463 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a1P02463 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a1P02463 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Col4a1P02463 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.63■□□□□ 0.73
Col4a1P02463 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col4a1P02463 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.63■□□□□ 0.73
Col4a1P02463 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a1P02463 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col4a1P02463 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a1P02463 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.63■□□□□ 0.73
Col4a1P02463 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.63■□□□□ 0.73
Col4a1P02463 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a1P02463 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a1P02463 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Gm18489-201ENSMUST00000172565 551 ntBASIC19.62■□□□□ 0.73
Col4a1P02463 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.62■□□□□ 0.73
Col4a1P02463 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.62■□□□□ 0.73
Col4a1P02463 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Col4a1P02463 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.62■□□□□ 0.73
Col4a1P02463 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a1P02463 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.62■□□□□ 0.73
Col4a1P02463 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Col4a1P02463 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col4a1P02463 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col4a1P02463 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col4a1P02463 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.61■□□□□ 0.73
Col4a1P02463 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.61■□□□□ 0.73
Col4a1P02463 Gm10576-201ENSMUST00000191927 825 ntBASIC19.61■□□□□ 0.73
Col4a1P02463 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.61■□□□□ 0.73
Col4a1P02463 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.61■□□□□ 0.73
Col4a1P02463 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.61■□□□□ 0.73
Col4a1P02463 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a1P02463 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.6■□□□□ 0.73
Col4a1P02463 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.6■□□□□ 0.73
Col4a1P02463 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.6■□□□□ 0.73
Col4a1P02463 Gm15427-201ENSMUST00000117288 531 ntBASIC19.6■□□□□ 0.73
Col4a1P02463 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.6■□□□□ 0.73
Col4a1P02463 Gm11745-201ENSMUST00000121669 448 ntBASIC19.6■□□□□ 0.73
Col4a1P02463 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Col4a1P02463 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col4a1P02463 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col4a1P02463 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col4a1P02463 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a1P02463 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col4a1P02463 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms