Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.41□□□□□ -0.58
Sh2d1aO88890 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh2d1aO88890 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.4□□□□□ -0.58
Sh2d1aO88890 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh2d1aO88890 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sh2d1aO88890 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sh2d1aO88890 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sh2d1aO88890 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Gm45058-201ENSMUST00000205810 766 ntBASIC11.39□□□□□ -0.59
Sh2d1aO88890 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sh2d1aO88890 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms