Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm44346-201ENSMUST00000198851 141 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Col5a1O88207 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col5a1O88207 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.41□□□□□ -0.1
Col5a1O88207 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.41□□□□□ -0.1
Col5a1O88207 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col5a1O88207 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col5a1O88207 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.41□□□□□ -0.1
Col5a1O88207 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.41□□□□□ -0.1
Col5a1O88207 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.41□□□□□ -0.1
Col5a1O88207 Gm25948-201ENSMUST00000175334 112 ntBASIC14.41□□□□□ -0.1
Col5a1O88207 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col5a1O88207 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.41□□□□□ -0.1
Col5a1O88207 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col5a1O88207 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col5a1O88207 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.4□□□□□ -0.1
Col5a1O88207 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.4□□□□□ -0.1
Col5a1O88207 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.4□□□□□ -0.1
Col5a1O88207 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.4□□□□□ -0.1
Col5a1O88207 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col5a1O88207 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.4□□□□□ -0.1
Col5a1O88207 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.4□□□□□ -0.1
Col5a1O88207 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col5a1O88207 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col5a1O88207 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col5a1O88207 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col5a1O88207 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.39□□□□□ -0.11
Col5a1O88207 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.39□□□□□ -0.11
Col5a1O88207 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.39□□□□□ -0.11
Col5a1O88207 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.39□□□□□ -0.11
Col5a1O88207 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col5a1O88207 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col5a1O88207 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col5a1O88207 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col5a1O88207 Mir1895-201ENSMUST00000122615 79 ntBASIC14.38□□□□□ -0.11
Col5a1O88207 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.38□□□□□ -0.11
Col5a1O88207 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col5a1O88207 Gm17271-201ENSMUST00000165535 355 ntBASIC14.38□□□□□ -0.11
Col5a1O88207 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.38□□□□□ -0.11
Col5a1O88207 Gm17968-201ENSMUST00000194902 784 ntBASIC14.38□□□□□ -0.11
Col5a1O88207 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.38□□□□□ -0.11
Col5a1O88207 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col5a1O88207 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col5a1O88207 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col5a1O88207 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col5a1O88207 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col5a1O88207 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col5a1O88207 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Col5a1O88207 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col5a1O88207 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col5a1O88207 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col5a1O88207 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms