Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.44□□□□□ -0.26
Pfdn2O70591 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pfdn2O70591 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.44□□□□□ -0.26
Pfdn2O70591 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.43□□□□□ -0.26
Pfdn2O70591 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pfdn2O70591 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.43□□□□□ -0.26
Pfdn2O70591 Gm12382-201ENSMUST00000122005 922 ntBASIC13.43□□□□□ -0.26
Pfdn2O70591 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.43□□□□□ -0.26
Pfdn2O70591 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.43□□□□□ -0.26
Pfdn2O70591 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.43□□□□□ -0.26
Pfdn2O70591 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pfdn2O70591 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.43□□□□□ -0.26
Pfdn2O70591 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pfdn2O70591 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pfdn2O70591 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pfdn2O70591 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.42□□□□□ -0.26
Pfdn2O70591 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Pfdn2O70591 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pfdn2O70591 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.42□□□□□ -0.26
Pfdn2O70591 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.42□□□□□ -0.26
Pfdn2O70591 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Pfdn2O70591 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pfdn2O70591 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pfdn2O70591 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.41□□□□□ -0.26
Pfdn2O70591 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pfdn2O70591 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pfdn2O70591 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Pfdn2O70591 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pfdn2O70591 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pfdn2O70591 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pfdn2O70591 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pfdn2O70591 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Pfdn2O70591 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pfdn2O70591 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms