Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm715-201ENSMUST00000117865 831 ntBASIC18.12■□□□□ 0.49
Stx1aO35526 Gm10653-202ENSMUST00000139570 835 ntBASIC18.12■□□□□ 0.49
Stx1aO35526 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Stx1aO35526 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Stx1aO35526 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Stx1aO35526 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Stx1aO35526 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Stx1aO35526 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Stx1aO35526 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Stx1aO35526 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Stx1aO35526 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.11■□□□□ 0.49
Stx1aO35526 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Stx1aO35526 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Stx1aO35526 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Stx1aO35526 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Stx1aO35526 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.1■□□□□ 0.49
Stx1aO35526 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Stx1aO35526 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.1■□□□□ 0.49
Stx1aO35526 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.1■□□□□ 0.49
Stx1aO35526 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.1■□□□□ 0.49
Stx1aO35526 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Stx1aO35526 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Stx1aO35526 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.1■□□□□ 0.49
Stx1aO35526 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stx1aO35526 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Stx1aO35526 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
Stx1aO35526 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.09■□□□□ 0.49
Stx1aO35526 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Stx1aO35526 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Stx1aO35526 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Stx1aO35526 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Stx1aO35526 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Stx1aO35526 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Stx1aO35526 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.09■□□□□ 0.49
Stx1aO35526 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.09■□□□□ 0.49
Stx1aO35526 Gm20760-201ENSMUST00000179197 648 ntBASIC18.09■□□□□ 0.49
Stx1aO35526 Gm21814-202ENSMUST00000203277 873 ntBASIC18.09■□□□□ 0.49
Stx1aO35526 Gm7370-201ENSMUST00000219471 767 ntBASIC18.09■□□□□ 0.49
Stx1aO35526 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.09■□□□□ 0.49
Stx1aO35526 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.09■□□□□ 0.49
Stx1aO35526 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.09■□□□□ 0.49
Stx1aO35526 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stx1aO35526 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
Stx1aO35526 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Stx1aO35526 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Stx1aO35526 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Stx1aO35526 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Stx1aO35526 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.08■□□□□ 0.49
Stx1aO35526 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Stx1aO35526 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms