Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Efnb3O35393 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.74□□□□□ -0.37
Efnb3O35393 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Efnb3O35393 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Efnb3O35393 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Gm12085-201ENSMUST00000119263 940 ntBASIC12.74□□□□□ -0.37
Efnb3O35393 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.74□□□□□ -0.37
Efnb3O35393 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.74□□□□□ -0.37
Efnb3O35393 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.74□□□□□ -0.37
Efnb3O35393 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Efnb3O35393 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Efnb3O35393 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Efnb3O35393 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Efnb3O35393 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Efnb3O35393 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.73□□□□□ -0.37
Efnb3O35393 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Efnb3O35393 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.73□□□□□ -0.37
Efnb3O35393 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Efnb3O35393 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.73□□□□□ -0.37
Efnb3O35393 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.73□□□□□ -0.37
Efnb3O35393 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.73□□□□□ -0.37
Efnb3O35393 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Efnb3O35393 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.73□□□□□ -0.37
Efnb3O35393 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.73□□□□□ -0.37
Efnb3O35393 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Efnb3O35393 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Efnb3O35393 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Efnb3O35393 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.72□□□□□ -0.37
Efnb3O35393 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Gm38027-201ENSMUST00000192315 235 ntBASIC12.72□□□□□ -0.37
Efnb3O35393 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.72□□□□□ -0.37
Efnb3O35393 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Efnb3O35393 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Efnb3O35393 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Efnb3O35393 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Efnb3O35393 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms