Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.59□□□□□ -0.39
Tnfsf11O35235 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.59□□□□□ -0.39
Tnfsf11O35235 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tnfsf11O35235 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfsf11O35235 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfsf11O35235 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tnfsf11O35235 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Tnfsf11O35235 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.58□□□□□ -0.4
Tnfsf11O35235 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.58□□□□□ -0.4
Tnfsf11O35235 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.58□□□□□ -0.4
Tnfsf11O35235 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.58□□□□□ -0.4
Tnfsf11O35235 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tnfsf11O35235 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.57□□□□□ -0.4
Tnfsf11O35235 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.57□□□□□ -0.4
Tnfsf11O35235 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.57□□□□□ -0.4
Tnfsf11O35235 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
Tnfsf11O35235 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms