Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.89□□□□□ -0.19
Gfra3O35118 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.89□□□□□ -0.19
Gfra3O35118 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.89□□□□□ -0.19
Gfra3O35118 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Gfra3O35118 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.89□□□□□ -0.19
Gfra3O35118 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.89□□□□□ -0.19
Gfra3O35118 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gfra3O35118 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Gfra3O35118 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Gfra3O35118 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Gfra3O35118 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.88□□□□□ -0.19
Gfra3O35118 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Gfra3O35118 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Gfra3O35118 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Gfra3O35118 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gfra3O35118 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.87□□□□□ -0.19
Gfra3O35118 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.87□□□□□ -0.19
Gfra3O35118 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Gfra3O35118 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Gfra3O35118 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.87□□□□□ -0.19
Gfra3O35118 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.87□□□□□ -0.19
Gfra3O35118 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.87□□□□□ -0.19
Gfra3O35118 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Gfra3O35118 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.87□□□□□ -0.19
Gfra3O35118 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Gfra3O35118 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.87□□□□□ -0.19
Gfra3O35118 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.87□□□□□ -0.19
Gfra3O35118 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gfra3O35118 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Gfra3O35118 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Gfra3O35118 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.86□□□□□ -0.19
Gfra3O35118 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.86□□□□□ -0.19
Gfra3O35118 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.86□□□□□ -0.19
Gfra3O35118 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.86□□□□□ -0.19
Gfra3O35118 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.86□□□□□ -0.19
Gfra3O35118 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gfra3O35118 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms