Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tcof1O08784 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tcof1O08784 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.79■□□□□ 0.6
Tcof1O08784 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Tcof1O08784 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.79■□□□□ 0.6
Tcof1O08784 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.79■□□□□ 0.6
Tcof1O08784 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.79■□□□□ 0.6
Tcof1O08784 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.79■□□□□ 0.6
Tcof1O08784 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcof1O08784 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Mir6404-201ENSMUST00000183699 94 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44357-201ENSMUST00000195897 142 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm19658-201ENSMUST00000196231 138 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44367-201ENSMUST00000196836 138 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44350-201ENSMUST00000197197 138 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44390-201ENSMUST00000197533 144 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44313-201ENSMUST00000198018 138 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44486-201ENSMUST00000198508 138 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44314-201ENSMUST00000199263 138 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44394-201ENSMUST00000199558 138 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44484-201ENSMUST00000199873 138 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44466-201ENSMUST00000200264 138 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm44359-201ENSMUST00000200671 138 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Gm7506-201ENSMUST00000207758 815 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.78■□□□□ 0.6
Tcof1O08784 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tcof1O08784 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Tcof1O08784 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Gm6443-201ENSMUST00000203599 874 ntBASIC18.77■□□□□ 0.6
Tcof1O08784 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tcof1O08784 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.77■□□□□ 0.6
Tcof1O08784 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tcof1O08784 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Tcof1O08784 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcof1O08784 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Tcof1O08784 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tcof1O08784 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tcof1O08784 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Tcof1O08784 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Tcof1O08784 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.76■□□□□ 0.59
Tcof1O08784 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tcof1O08784 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Tcof1O08784 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Tcof1O08784 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcof1O08784 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.75■□□□□ 0.59
Tcof1O08784 Gm25406-201ENSMUST00000157599 105 ntBASIC18.75■□□□□ 0.59
Tcof1O08784 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.75■□□□□ 0.59
Tcof1O08784 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.75■□□□□ 0.59
Tcof1O08784 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcof1O08784 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms