Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Gm6345-202ENSMUST00000180900 204 ntBASIC16.55■□□□□ 0.24
Atf6F6VAN0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Atf6F6VAN0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.54■□□□□ 0.24
Atf6F6VAN0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Atf6F6VAN0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Gm23634-201ENSMUST00000175071 91 ntBASIC16.53■□□□□ 0.24
Atf6F6VAN0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.53■□□□□ 0.24
Atf6F6VAN0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.53■□□□□ 0.24
Atf6F6VAN0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.52■□□□□ 0.24
Atf6F6VAN0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.52■□□□□ 0.24
Atf6F6VAN0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf6F6VAN0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Atf6F6VAN0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Gm44430-201ENSMUST00000203376 995 ntBASIC16.52■□□□□ 0.24
Atf6F6VAN0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Atf6F6VAN0 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.52■□□□□ 0.23
Atf6F6VAN0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf6F6VAN0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf6F6VAN0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf6F6VAN0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf6F6VAN0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf6F6VAN0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf6F6VAN0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Atf6F6VAN0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Atf6F6VAN0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Atf6F6VAN0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms