Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh2d4bA6X942 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Gm6736-201ENSMUST00000166583 948 ntBASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh2d4bA6X942 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Phf7-203ENSMUST00000226565 1971 ntBASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Gm15165-201ENSMUST00000118140 502 ntBASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Gm27702-201ENSMUST00000184512 56 ntBASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Gm5264-201ENSMUST00000190584 848 ntBASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh2d4bA6X942 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Gm29707-201ENSMUST00000196325 491 ntBASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh2d4bA6X942 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44357-201ENSMUST00000195897 142 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm19658-201ENSMUST00000196231 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44367-201ENSMUST00000196836 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44350-201ENSMUST00000197197 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44390-201ENSMUST00000197533 144 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44313-201ENSMUST00000198018 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44486-201ENSMUST00000198508 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44454-201ENSMUST00000198541 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44314-201ENSMUST00000199263 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44394-201ENSMUST00000199558 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44484-201ENSMUST00000199873 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44466-201ENSMUST00000200264 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm44359-201ENSMUST00000200671 138 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms