Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Gm29707-201ENSMUST00000196325 491 ntBASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav12d-1A0N8R0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-1A0N8R0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-1A0N8R0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-1A0N8R0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav12d-1A0N8R0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-1A0N8R0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav12d-1A0N8R0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Gm20760-201ENSMUST00000179197 648 ntBASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Gm21814-202ENSMUST00000203277 873 ntBASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav12d-1A0N8R0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Gm715-201ENSMUST00000117865 831 ntBASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12d-1A0N8R0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-1A0N8R0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12d-1A0N8R0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms