Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc112A0AUP1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc112A0AUP1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc112A0AUP1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc112A0AUP1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Mir5130-201ENSMUST00000175160 84 ntBASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc112A0AUP1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.39■□□□□ 0.54
Ccdc112A0AUP1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc112A0AUP1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc112A0AUP1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc112A0AUP1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Gm45058-201ENSMUST00000205810 766 ntBASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc112A0AUP1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 App-207ENSMUST00000227737 2827 ntBASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc112A0AUP1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms