Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Gm3880A0A1B0GSB3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Gm3880A0A1B0GSB3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC7.98□□□□□ -1.13
Gm3880A0A1B0GSB3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Gm3880A0A1B0GSB3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Gm3880A0A1B0GSB3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 App-207ENSMUST00000227737 2827 ntBASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC7.97□□□□□ -1.13
Gm3880A0A1B0GSB3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Gm9768-201ENSMUST00000206007 2861 ntBASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
Gm3880A0A1B0GSB3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm9939-201ENSMUST00000067161 1154 ntBASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm21451-201ENSMUST00000111062 2775 ntBASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Gm3880A0A1B0GSB3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms