Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 App-207ENSMUST00000227737 2827 ntBASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43799-201ENSMUST00000201845 579 ntBASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms