Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-1A0A0B4J1P8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gm9103-201ENSMUST00000119371 405 ntBASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gm27000-201ENSMUST00000182943 842 ntBASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv13-1A0A0B4J1P8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv13-1A0A0B4J1P8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv13-1A0A0B4J1P8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv13-1A0A0B4J1P8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv13-1A0A0B4J1P8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Mir770-201ENSMUST00000103252 94 ntBASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12□□□□□ -0.49
Trbv13-1A0A0B4J1P8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms