Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Phf7-203ENSMUST00000226565 1971 ntBASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav4-3A0A0B4J1K1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm6211-202ENSMUST00000167849 925 ntBASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm5297-201ENSMUST00000198555 1171 ntBASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 AC166341.7-201ENSMUST00000221698 126 ntBASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 App-207ENSMUST00000227737 2827 ntBASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm45560-201ENSMUST00000211492 1472 ntBASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav4-3A0A0B4J1K1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm6365-201ENSMUST00000054711 744 ntBASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav4-3A0A0B4J1K1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Gm45203-201ENSMUST00000206384 1831 ntBASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav4-3A0A0B4J1K1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms