Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm7791-201ENSMUST00000219066 539 ntBASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6d-5A0A075B6B9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6d-5A0A075B6B9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6d-5A0A075B6B9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Phf7-203ENSMUST00000226565 1971 ntBASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6d-5A0A075B6B9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm7712-202ENSMUST00000222331 1510 ntBASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13□□□□□ -0.33
Trav6d-5A0A075B6B9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms