Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12d-3A0A075B6A4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav12d-3A0A075B6A4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.04□□□□□ -0.48
Trav12d-3A0A075B6A4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav12d-3A0A075B6A4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms