Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Gm8520-201ENSMUST00000186517 868 ntBASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav7-6A0A075B640 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Sybu-209ENSMUST00000228639 4113 ntBASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav7-6A0A075B640 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Gm7791-201ENSMUST00000219066 539 ntBASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav7-6A0A075B640 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms