Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
PCDHB3Q9Y5E6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHB3Q9Y5E6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 RNU6-1125P-201ENST00000363601 107 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 SNORA48.7-201ENST00000391302 135 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 RPL21P65-201ENST00000406094 466 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 SNORA11F-201ENST00000408237 128 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 RNU6-628P-201ENST00000410675 107 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 Y_RNA.621-201ENST00000411065 96 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 HMGN1P7-201ENST00000491722 313 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 RN7SL812P-201ENST00000493791 279 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 AC091826.1-201ENST00000514065 313 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 RNA5SP73-201ENST00000516744 108 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 MIR6891-201ENST00000618788 93 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 AC034229.5-201ENST00000624258 185 ntBASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB3Q9Y5E6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 RNU6-944P-201ENST00000364023 107 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 SNORA4.2-201ENST00000365313 147 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 RNU6-816P-201ENST00000390914 107 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 RNU6-1268P-201ENST00000391214 107 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 RNU6-1239P-201ENST00000391310 107 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 HSPE1P26-201ENST00000405341 275 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 MIR1912-201ENST00000410389 80 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 SNRPGP10-201ENST00000432323 225 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 ABCF2P2-201ENST00000450549 296 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 RNU7-23P-201ENST00000459465 62 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 AP002884.2-201ENST00000471647 395 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 RNU7-61P-201ENST00000515897 61 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 CYCSP29-201ENST00000533731 318 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 AC022523.2-201ENST00000561045 150 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 MIR3163-201ENST00000581592 73 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 AC140479.6-201ENST00000633535 357 ntBASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB3Q9Y5E6 UBE3AP2-201ENST00000429033 2259 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 MIR383-201ENST00000362257 73 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 U8.17-201ENST00000391292 132 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 Y_RNA.601-201ENST00000410500 113 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 RNA5SP39-201ENST00000411245 120 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 AL353689.1-201ENST00000438895 199 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 RNU7-164P-201ENST00000459221 62 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 RNU7-123P-201ENST00000515911 60 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 RNU6-1231P-201ENST00000517185 103 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 AC004486.1-201ENST00000546846 233 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 RN7SL703P-201ENST00000578485 302 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 MIR432-201ENST00000606207 94 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 uc_338.14-201ENST00000613162 166 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 MIR4727-201ENST00000622232 55 ntBASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB3Q9Y5E6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 MAPK10-253ENST00000641010 4072 ntBASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 MIR331-201ENST00000362302 94 ntBASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 Y_RNA.253-201ENST00000364562 112 ntBASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 MIR520G-201ENST00000385064 90 ntBASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 MIR1911-201ENST00000410783 80 ntBASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 AL133162.1-201ENST00000463228 453 ntBASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB3Q9Y5E6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 FAM35DP-201ENST00000323387 2712 ntBASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 RNU6-1099P-201ENST00000363533 107 ntBASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 RNA5SP513-201ENST00000364648 118 ntBASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 SNORA2.2-201ENST00000365473 135 ntBASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 RNU6-198P-201ENST00000384258 104 ntBASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 MIR23B-201ENST00000384832 97 ntBASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 RN7SKP156-201ENST00000410308 342 ntBASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 AC097463.2-201ENST00000421074 142 ntBASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 AC010099.1-201ENST00000455434 375 ntBASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB3Q9Y5E6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms