Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 MIR5692C2-201ENST00000577959 77 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 MIR3910-1-201ENST00000580936 111 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 AL359854.1-201ENST00000614203 1594 ntBASIC3.17□□□□□ -1.9
PCDHB4Q9Y5E5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 Y_RNA.170-201ENST00000363746 110 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 SNORD115-30-201ENST00000364117 82 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 SNORA14A-201ENST00000364773 135 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 SNORA19-201ENST00000384737 128 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 RNA5SP344-201ENST00000411081 104 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 AC097463.2-201ENST00000421074 142 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 EIF4EP4-201ENST00000424916 578 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 RPL23AP83-201ENST00000434984 473 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 HMGB3P3-201ENST00000510526 400 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 SNORD59.2-201ENST00000516873 68 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 AL162274.2-201ENST00000614406 332 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 AC008873.1-201ENST00000625051 138 ntBASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHB4Q9Y5E5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCDHB4Q9Y5E5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.15□□□□□ -1.9
PCDHB4Q9Y5E5 AL035425.3-201ENST00000564206 4996 ntBASIC3.15□□□□□ -1.9
PCDHB4Q9Y5E5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-525P-201ENST00000363685 104 ntBASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 AL357139.1-201ENST00000407792 426 ntBASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 TOMM22P2-201ENST00000430735 237 ntBASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 AC091021.1-201ENST00000468051 388 ntBASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 MRPS18CP4-201ENST00000535821 231 ntBASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 AL670379.2-201ENST00000604983 252 ntBASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 MAPK10-322ENST00000641485 4530 ntBASIC3.15□□□□□ -1.91
PCDHB4Q9Y5E5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 SNORD32B-201ENST00000364460 84 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 RNA5SP354-201ENST00000391247 136 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 AL031003.1-201ENST00000404229 172 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 AL139281.1-201ENST00000422120 335 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 AL135790.2-201ENST00000437701 267 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 Y_RNA.637-201ENST00000459424 114 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 AC140059.1-201ENST00000489238 361 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 SNORA70.24-201ENST00000517233 118 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 AC009127.3-201ENST00000570531 403 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 MIR4765-201ENST00000585007 77 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 RPL30P11-203ENST00000598995 310 ntBASIC3.14□□□□□ -1.91
PCDHB4Q9Y5E5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 U3.8-201ENST00000363675 217 ntBASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-804P-201ENST00000384286 107 ntBASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6-763P-201ENST00000390865 106 ntBASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 AC103810.1-201ENST00000579873 453 ntBASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHB4Q9Y5E5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 Y_RNA.243-201ENST00000364481 109 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 AL451074.5-201ENST00000415894 435 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 AC244505.4-201ENST00000434905 287 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 SSXP5-201ENST00000443473 287 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 U8.19-201ENST00000459095 133 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 AP004217.1-201ENST00000480579 346 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 MRPS36P2-201ENST00000512569 299 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 MTND5P41-201ENST00000517498 206 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 AC104465.1-201ENST00000611365 139 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 AC002064.3-201ENST00000623448 346 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 AC090517.3-201ENST00000625170 141 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 AC110079.1-202ENST00000635213 138 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHB4Q9Y5E5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms