Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC006001.4-201ENST00000622243 395 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 AC010889.1-201ENST00000566193 2666 ntBASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTDP1Q9Y5B0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 MTND5P35-201ENST00000557537 1720 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.179-201ENST00000363844 90 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.270-201ENST00000364693 104 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.331-201ENST00000365267 102 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 MIR549A-201ENST00000385268 96 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 Y_RNA.793-201ENST00000411222 111 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 RPL23AP36-201ENST00000413895 458 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 AC007215.1-201ENST00000464893 276 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 RNU5F-2P-201ENST00000516066 82 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 CYCSP23-201ENST00000519781 313 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 MIR3923-201ENST00000579521 83 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 MIR3117-201ENST00000584034 78 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 AC090115.4-201ENST00000609970 188 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 AC093831.2-201ENST00000624393 3427 ntBASIC3.16□□□□□ -1.9
CTDP1Q9Y5B0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CTDP1Q9Y5B0 BX322639.1-202ENST00000423987 2213 ntBASIC3.15□□□□□ -1.9
CTDP1Q9Y5B0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.76-201ENST00000362931 109 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 SNORD114-19-201ENST00000363072 75 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.150-201ENST00000363562 102 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 SNORA72.2-201ENST00000365028 127 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-750P-201ENST00000390946 107 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 MIR320B2-201ENST00000408479 138 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 RNU4-61P-201ENST00000411243 107 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 SUMO1P4-201ENST00000429430 302 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 POLR2KP2-201ENST00000438155 177 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 UQCRBP2-201ENST00000447827 297 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 AC007395.1-201ENST00000451333 677 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 MIR4446-201ENST00000578505 67 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 AL162424.1-201ENST00000602325 221 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 AL356575.1-201ENST00000603008 283 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 AL356280.1-201ENST00000603614 379 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 MZT1P2-201ENST00000604387 248 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 AL034555.1-201ENST00000604816 211 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.15□□□□□ -1.91
CTDP1Q9Y5B0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-529P-201ENST00000363383 104 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-740P-201ENST00000364734 105 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-245P-201ENST00000384020 107 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-793P-201ENST00000384233 104 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-301P-201ENST00000384277 107 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 AL139095.1-201ENST00000404326 391 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 RNA5SP508-201ENST00000411327 119 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.644-201ENST00000459006 113 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-625P-201ENST00000459412 107 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 AC074133.1-201ENST00000515696 183 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.674-201ENST00000516362 113 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 AC233702.2-202ENST00000562547 291 ntBASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.14□□□□□ -1.91
CTDP1Q9Y5B0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 MIR410-201ENST00000362222 80 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 MIR411-201ENST00000362239 96 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 RNU4-82P-201ENST00000362443 140 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.498-201ENST00000384460 102 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 CBX3P9-201ENST00000402326 552 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 RPL23AP3-201ENST00000453844 468 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 RN7SL75P-201ENST00000461926 281 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 AC024405.2-202ENST00000532731 184 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 AC018448.1-201ENST00000552843 316 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 SNRPGP20-201ENST00000604477 205 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 AC005520.5-201ENST00000613926 164 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 MIR7515-201ENST00000637837 67 ntBASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTDP1Q9Y5B0 AL109809.4-201ENST00000603520 2185 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.180-201ENST00000363867 113 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.275-201ENST00000364726 110 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.383-201ENST00000383855 97 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.446-201ENST00000384178 104 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 SNORA46.1-201ENST00000391069 153 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.590-201ENST00000410140 107 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 MRPS10P1-201ENST00000448483 130 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 AC005042.3-201ENST00000453230 174 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 AC091179.3-201ENST00000474761 144 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.679-201ENST00000516416 91 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 AL137100.2-201ENST00000555786 315 ntBASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 459.6 ms