Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 MTND1P17-201ENST00000448961 204 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 AC013470.1-201ENST00000453438 462 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 AC108729.2-201ENST00000476543 840 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 RPL39P34-201ENST00000477141 156 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 AC114755.3-201ENST00000481111 251 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 RNU6-848P-201ENST00000515948 107 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 RNU6-617P-201ENST00000516147 107 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 RNU6-473P-201ENST00000516164 107 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 RNU6-150P-201ENST00000516237 95 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 AC006504.8-201ENST00000621046 635 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 AC231657.1-201ENST00000624313 397 ntBASIC-0.88□□□□□ -2.55
AP4S1Q9Y587 RNU6-562P-201ENST00000362731 107 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 RNU6-190P-201ENST00000384154 102 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 RNU6-278P-201ENST00000390945 109 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 MTND3P20-201ENST00000407663 186 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 RNU4-22P-201ENST00000411058 166 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 AL158050.1-201ENST00000416077 457 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 DEFB130D-201ENST00000426866 237 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 MTND4P32-201ENST00000437189 1237 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 MTCO3P42-201ENST00000509488 518 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 MTCO3P39-201ENST00000514812 518 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 AC112206.4-201ENST00000515142 405 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 RNA5SP285-201ENST00000516619 119 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 AC026616.1-201ENST00000523157 525 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 AC100830.2-201ENST00000581636 240 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 MIR6759-201ENST00000638110 65 ntBASIC-0.89□□□□□ -2.55
AP4S1Q9Y587 SNORD115-24-201ENST00000363528 82 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 RNU6-105P-201ENST00000363909 104 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 AL136310.1-201ENST00000404926 654 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 RNU6-897P-201ENST00000517135 105 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 AP002453.2-201ENST00000533503 320 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 AC138869.1-201ENST00000568623 124 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 VN1R87P-201ENST00000596706 487 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 AC008608.1-201ENST00000603910 127 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 AC005520.5-201ENST00000613926 164 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 AL391099.1-201ENST00000624635 187 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 AC005592.1-201ENST00000566527 1640 ntBASIC-0.9□□□□□ -2.55
AP4S1Q9Y587 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 SNORD114-11-201ENST00000363738 75 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 RNU6-480P-201ENST00000384332 107 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 RNU6-692P-201ENST00000384496 107 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 SNORA8.3-201ENST00000384679 139 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 MIR520C-201ENST00000385005 87 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 RNU2-3P-201ENST00000410144 191 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AC133104.1-201ENST00000429100 218 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AP000542.1-201ENST00000448473 371 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 RPS29P15-201ENST00000458329 171 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AC093027.1-201ENST00000546698 429 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AC090897.1-201ENST00000580909 226 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 MIR4676-201ENST00000583078 72 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AC012433.1-201ENST00000588916 398 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AC020891.4-201ENST00000605745 93 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AL359697.1-201ENST00000624879 587 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 U4.7-201ENST00000638126 106 ntBASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.91□□□□□ -2.56
AP4S1Q9Y587 RNU4-84P-201ENST00000364200 139 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 RNU6-934P-201ENST00000365154 107 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 SNORD75.1-201ENST00000408373 60 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 MIR1185-2-201ENST00000408687 86 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 AC078809.1-201ENST00000427601 140 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 SUMO1P2-201ENST00000452524 304 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 USP9YP25-201ENST00000457708 443 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 RNA5SP480-201ENST00000516840 109 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 AP001372.4-201ENST00000524889 472 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 MIR4771-2-201ENST00000577758 74 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 MIR4771-1-201ENST00000582617 74 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 AP001180.6-201ENST00000584918 159 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 DEFB131E-202ENST00000602581 683 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 AC068792.1-201ENST00000621354 417 ntBASIC-0.92□□□□□ -2.56
AP4S1Q9Y587 RNA5SP257-201ENST00000363023 116 ntBASIC-0.93□□□□□ -2.56
AP4S1Q9Y587 RNA5SP48-201ENST00000363969 126 ntBASIC-0.93□□□□□ -2.56
AP4S1Q9Y587 SNORD49B-201ENST00000365172 72 ntBASIC-0.93□□□□□ -2.56
AP4S1Q9Y587 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.93□□□□□ -2.56
AP4S1Q9Y587 MIR578-201ENST00000384828 96 ntBASIC-0.93□□□□□ -2.56
AP4S1Q9Y587 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.93□□□□□ -2.56
AP4S1Q9Y587 MTND4P19-201ENST00000446659 478 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms