Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AF235103.2-201ENST00000525753 346 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 MIR5094-201ENST00000578766 85 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 MIR4303-201ENST00000581299 66 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 AC060780.3-201ENST00000589464 80 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 AC009248.2-201ENST00000619826 254 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 MIR424-201ENST00000362227 98 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-661P-201ENST00000362409 107 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.86-201ENST00000363020 111 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-17P-201ENST00000384245 107 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-18P-201ENST00000384527 107 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 MIR153-2-201ENST00000385225 87 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 RNA5SP504-201ENST00000410676 117 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AC060773.1-201ENST00000421698 310 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AC245047.4-201ENST00000433189 144 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 SNORD5.1-201ENST00000458800 75 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 RPL30P10-201ENST00000488148 337 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AC069439.1-201ENST00000494739 167 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 MTND5P5-201ENST00000503764 376 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AC011406.1-201ENST00000512440 370 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-948P-201ENST00000516374 107 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 SNORA31.17-201ENST00000516953 127 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AC069114.2-201ENST00000604699 304 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AC093913.1-201ENST00000614178 329 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAPPC4Q9Y296 AC027514.1-201ENST00000588561 1603 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-862P-201ENST00000362804 105 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.319-201ENST00000365138 92 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-439P-201ENST00000384188 106 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.490-201ENST00000384413 102 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.505-201ENST00000384489 102 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 SNORA17.3-201ENST00000391159 129 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-510P-201ENST00000391239 108 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 AL356776.1-201ENST00000406574 447 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 RPL30P16-201ENST00000419341 429 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 AL139396.1-201ENST00000421137 167 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 USP9YP30-201ENST00000430729 455 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-358P-201ENST00000516564 75 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 RNU1-54P-201ENST00000517181 120 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 MIR4742-201ENST00000581069 85 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 BNIP3P10-201ENST00000605360 577 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 AL512598.1-201ENST00000610158 273 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 AC098679.4-201ENST00000624241 654 ntBASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
TRAPPC4Q9Y296 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 ZNF299P-201ENST00000406845 1804 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-1059P-201ENST00000363752 98 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-595P-201ENST00000363944 107 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-1305P-201ENST00000364353 104 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-842P-201ENST00000384269 107 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.533-201ENST00000384596 114 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 AC016717.1-201ENST00000448918 286 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 AC112492.4-201ENST00000456549 352 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-1041P-201ENST00000516254 102 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 RNA5SP384-201ENST00000516615 116 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 AL161670.1-201ENST00000554348 137 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 MIR4790-201ENST00000577799 79 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 MIR338-201ENST00000636369 67 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 AC068205.3-201ENST00000636385 468 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
TRAPPC4Q9Y296 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 Y_RNA.72-201ENST00000362894 103 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 RNU1-96P-201ENST00000364163 162 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 SNORA63D-201ENST00000364359 132 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-1019P-201ENST00000364424 107 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 RNU6-159P-201ENST00000391080 106 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 MIR548K-201ENST00000408406 116 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 MTND3P8-201ENST00000412909 339 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 RPL21P111-201ENST00000418453 477 ntBASIC1.24□□□□□ -2.21
TRAPPC4Q9Y296 CST2P1-201ENST00000425770 87 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms