Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RPS26P55-201ENST00000471178 356 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 AC093534.1-201ENST00000504977 132 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 RNU6-506P-201ENST00000516553 94 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 AC019176.1-201ENST00000518519 225 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 AC097065.2-201ENST00000608159 533 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 AL353149.1-201ENST00000610667 244 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 AC006504.8-201ENST00000621046 635 ntBASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
NPIPA1Q9UND3 RNU6-451P-201ENST00000362921 107 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 Y_RNA.256-201ENST00000364594 104 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 SNORA4.2-201ENST00000365313 147 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 RNU6-203P-201ENST00000384038 104 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 MIR499A-201ENST00000384903 122 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 MIR586-201ENST00000385035 97 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 COX6CP10-201ENST00000416832 224 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 AL445305.1-201ENST00000432577 575 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 AL135790.2-201ENST00000437701 267 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 MTCO3P18-201ENST00000440206 761 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 Z83846.1-201ENST00000446798 265 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 snoU13.27-201ENST00000459278 104 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 HMGN2P26-201ENST00000463169 339 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 MTCO2P30-201ENST00000503662 364 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 RNA5SP445-201ENST00000515889 115 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 MIR1321-201ENST00000637766 79 ntBASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
NPIPA1Q9UND3 RNY3P3-201ENST00000363816 102 ntBASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 MIR517A-201ENST00000385001 87 ntBASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 RNA5SP467-201ENST00000391274 118 ntBASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 AC079354.2-201ENST00000453523 154 ntBASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 AC079140.2-201ENST00000506193 142 ntBASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 RNU6-256P-201ENST00000516747 97 ntBASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 AC019193.3-201ENST00000609144 554 ntBASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 AL138726.1-201ENST00000614873 333 ntBASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 AL353770.2-201ENST00000620024 78 ntBASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.29□□□□□ -2.2
NPIPA1Q9UND3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 RNU6-392P-201ENST00000364926 101 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 RNU4-9P-201ENST00000364951 139 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 Y_RNA.530-201ENST00000384587 101 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 RNA5SP323-201ENST00000391094 133 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 MRPL35P1-201ENST00000404272 572 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 TRBVA-201ENST00000498804 316 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 AC103851.1-201ENST00000506833 274 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 ACA59.1-201ENST00000515966 143 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 SNORA25.14-201ENST00000516481 132 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 RNA5SP54-201ENST00000516951 92 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 RNU6-902P-201ENST00000517212 91 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 MIR3937-201ENST00000580135 106 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 MIR3672-201ENST00000584290 82 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 PRR13P7-201ENST00000605538 430 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 AC091895.1-201ENST00000624494 256 ntBASIC1.28□□□□□ -2.2
NPIPA1Q9UND3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 SNORA72.2-201ENST00000365028 127 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 SNORA67.2-201ENST00000384300 149 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 AC016907.1-201ENST00000419483 435 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 MTCO2P7-201ENST00000446518 666 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 RNU7-34P-201ENST00000459394 64 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 RNU7-66P-201ENST00000459469 62 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 AC099513.1-201ENST00000490423 301 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 RNU6-344P-201ENST00000516635 111 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 RNU6-273P-201ENST00000516937 96 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 MTND1P5-201ENST00000517906 940 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 MIR4709-201ENST00000577272 72 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 AL121890.5-201ENST00000620848 304 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 snoZ196.1-201ENST00000625269 89 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 AC024614.3-201ENST00000637860 256 ntBASIC1.27□□□□□ -2.21
NPIPA1Q9UND3 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 U8.1-201ENST00000362843 134 ntBASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 SNORD87-201ENST00000364849 89 ntBASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 Y_RNA.436-201ENST00000384097 102 ntBASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 RNU6-541P-201ENST00000384709 110 ntBASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 AL161935.2-201ENST00000414627 60 ntBASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 RPL30P13-201ENST00000418873 348 ntBASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 RPL30P16-201ENST00000419341 429 ntBASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 ZNF885P-201ENST00000420174 1098 ntBASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.26□□□□□ -2.21
NPIPA1Q9UND3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms