Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 7SK.13-201ENST00000622040 250 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 AC139792.3-201ENST00000623525 224 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 MIR338-201ENST00000636369 67 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 MTND4P5-201ENST00000435821 1374 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 RNU6-545P-201ENST00000362681 104 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 RNU6-534P-201ENST00000364877 106 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 MIR586-201ENST00000385035 97 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 RNU6-648P-201ENST00000410190 107 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 RNA5SP384-201ENST00000516615 116 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 RNU6-835P-201ENST00000516974 104 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 AL118558.2-201ENST00000556294 238 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 AL158211.1-201ENST00000566763 763 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 MIR4709-201ENST00000577272 72 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 AC005730.3-201ENST00000583067 366 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 AC119751.7-201ENST00000600494 245 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 AC092747.3-201ENST00000603769 301 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 MZT1P2-201ENST00000604387 248 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 AC104458.1-201ENST00000608243 463 ntBASIC1.2□□□□□ -2.22
CTNNA3Q9UI47 RNU4-38P-201ENST00000364472 129 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 SNORA69-201ENST00000383895 132 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 RNU6-214P-201ENST00000384130 107 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 RNU6-1119P-201ENST00000384349 108 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 RNA5SP494-201ENST00000410653 129 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 AL663109.1-201ENST00000411498 844 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 NFU1P2-201ENST00000448700 469 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 HSPE1P13-201ENST00000451143 297 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 MTCO1P29-201ENST00000496868 288 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 RNA5SP401-201ENST00000515920 127 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 RNU6-1146P-201ENST00000516282 102 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 AC024995.1-201ENST00000523014 93 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 SNRPGP20-201ENST00000604477 205 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 AC211469.2-201ENST00000605461 205 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 AC090582.1-201ENST00000636321 199 ntBASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CTNNA3Q9UI47 SNORD115-8-201ENST00000363856 82 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 RNU6-1317P-201ENST00000364582 104 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 SNORD115-38-201ENST00000365037 82 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 Y_RNA.378-201ENST00000365652 113 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 DEFB108C-201ENST00000400154 252 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 AL445305.1-201ENST00000432577 575 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 AC004386.2-201ENST00000441858 148 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 AC073910.1-201ENST00000445047 438 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 AC074290.1-201ENST00000448883 135 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 AC091435.1-201ENST00000505442 584 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 SNORA19.2-201ENST00000516013 114 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 Y_RNA.688-201ENST00000516565 95 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 RNU6-344P-201ENST00000516635 111 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 RN7SL793P-201ENST00000583259 296 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 AC008873.1-201ENST00000625051 138 ntBASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 FER-210ENST00000628534 558 ntTSL 5 BASIC1.18□□□□□ -2.22
CTNNA3Q9UI47 RNU4-66P-201ENST00000365199 138 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 RNU4-20P-201ENST00000365601 151 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 RNU6-128P-201ENST00000383976 107 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 SNORD116-9-201ENST00000384000 95 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 RNU6-418P-201ENST00000384035 107 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 RNU6-968P-201ENST00000384076 107 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 SNORD116-3-201ENST00000384287 95 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 SNORA67.2-201ENST00000384300 149 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 SNORD116-7-201ENST00000384404 95 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 SNORD116-5-201ENST00000384462 95 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 CALM2P3-201ENST00000400429 449 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 MIR320B2-201ENST00000408479 138 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 TPT1P7-201ENST00000458300 517 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 RNU7-34P-201ENST00000459394 64 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 RPL39P5-202ENST00000512505 151 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 AC006362.1-201ENST00000567392 174 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 HSPE1P19-201ENST00000603327 295 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 AL357078.3-201ENST00000607528 618 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 AC092807.2-201ENST00000609367 243 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 MIR6857-201ENST00000613267 93 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 AC126177.8-201ENST00000618339 1015 ntBASIC1.17□□□□□ -2.22
CTNNA3Q9UI47 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 snoU2-30.2-201ENST00000362805 70 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 RNU6-137P-201ENST00000363680 108 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 RNA5SP259-201ENST00000365541 109 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 RNU6-245P-201ENST00000384020 107 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 RNU6-1042P-201ENST00000384204 107 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 MTND3P9-201ENST00000429526 346 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms