Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR4G1P-203ENST00000641984 1631 ntBASIC0.64□□□□□ -2.31
VAPAQ9P0L0 AP000568.1-201ENST00000282964 442 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 RNU6-199P-201ENST00000362954 107 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 RNU6-996P-201ENST00000365438 107 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 RNU6-969P-201ENST00000383900 105 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 AL606923.1-201ENST00000406616 190 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.63□□□□□ -2.31
VAPAQ9P0L0 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.63□□□□□ -2.31
VAPAQ9P0L0 TRBVA-201ENST00000498804 316 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 RNU6-344P-201ENST00000516635 111 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 RNU7-128P-201ENST00000517247 62 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 MTND1P35-201ENST00000526739 508 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.63□□□□□ -2.31
VAPAQ9P0L0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.63□□□□□ -2.31
VAPAQ9P0L0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.63□□□□□ -2.31
VAPAQ9P0L0 AC004584.2-201ENST00000570407 410 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 AL136370.1-201ENST00000608166 691 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 AC072046.2-201ENST00000618366 268 ntBASIC0.63□□□□□ -2.31
VAPAQ9P0L0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.63□□□□□ -2.31
VAPAQ9P0L0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
VAPAQ9P0L0 RNA5SP361-201ENST00000362686 118 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.62□□□□□ -2.31
VAPAQ9P0L0 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
VAPAQ9P0L0 MIR450B-201ENST00000401182 78 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.62□□□□□ -2.31
VAPAQ9P0L0 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.62□□□□□ -2.31
VAPAQ9P0L0 STAG3L5P-204ENST00000443759 179 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 AC073415.1-201ENST00000449240 153 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.62□□□□□ -2.31
VAPAQ9P0L0 AC087854.1-201ENST00000519706 414 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 DEFB108E-201ENST00000524692 240 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 SCOCP1-201ENST00000554676 349 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 AL137100.2-201ENST00000555786 315 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 AC004223.2-201ENST00000590309 544 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 AL162424.1-201ENST00000602325 221 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 AL050303.3-201ENST00000613704 284 ntBASIC0.62□□□□□ -2.31
VAPAQ9P0L0 AC023934.1-201ENST00000574529 2389 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 Y_RNA.159-201ENST00000363674 87 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 RNU6-1329P-201ENST00000365664 107 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 MIR521-1-201ENST00000384902 87 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 MIR653-201ENST00000385279 96 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 SNORA26.8-201ENST00000391306 124 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 AL451046.2-201ENST00000403074 277 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 RNA5SP504-201ENST00000410676 117 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.61□□□□□ -2.31
VAPAQ9P0L0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.61□□□□□ -2.31
VAPAQ9P0L0 RPL39P39-201ENST00000455840 151 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 RPS26P48-201ENST00000491713 339 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 RNU6-189P-201ENST00000516120 101 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 RNU7-99P-201ENST00000516271 62 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 AC011604.1-201ENST00000545978 196 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 AC090049.2-201ENST00000550377 109 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.61□□□□□ -2.31
VAPAQ9P0L0 AL357078.3-201ENST00000607528 618 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 SNORD11B-201ENST00000607707 90 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.61□□□□□ -2.31
VAPAQ9P0L0 U6.73-201ENST00000619194 103 ntBASIC0.61□□□□□ -2.31
VAPAQ9P0L0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.61□□□□□ -2.31
VAPAQ9P0L0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
VAPAQ9P0L0 RNU4-12P-201ENST00000365233 139 ntBASIC0.6□□□□□ -2.31
VAPAQ9P0L0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.6□□□□□ -2.31
VAPAQ9P0L0 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
VAPAQ9P0L0 AC005840.1-201ENST00000498412 377 ntBASIC0.6□□□□□ -2.31
VAPAQ9P0L0 RNU6-322P-201ENST00000516010 103 ntBASIC0.6□□□□□ -2.31
VAPAQ9P0L0 RNU6-917P-201ENST00000516294 104 ntBASIC0.6□□□□□ -2.31
VAPAQ9P0L0 AL354950.2-201ENST00000617939 290 ntBASIC0.6□□□□□ -2.31
VAPAQ9P0L0 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
VAPAQ9P0L0 MIR96-201ENST00000362288 78 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 AL049545.1-201ENST00000401856 572 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.59□□□□□ -2.31
VAPAQ9P0L0 AL365203.2-201ENST00000423444 196 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 MTCO3P18-201ENST00000440206 761 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.59□□□□□ -2.31
VAPAQ9P0L0 TPTE2P5-203ENST00000458118 728 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 AC108729.3-201ENST00000513484 108 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 RNA5SP255-201ENST00000516370 107 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 RNU6-1038P-201ENST00000516516 104 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 MTND1P5-201ENST00000517906 940 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 AC007834.2-201ENST00000536310 343 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 APOOP3-201ENST00000536787 586 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.59□□□□□ -2.31
VAPAQ9P0L0 AC016727.1-205ENST00000605437 569 ntBASIC0.59□□□□□ -2.31
VAPAQ9P0L0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.59□□□□□ -2.31
VAPAQ9P0L0 AC068700.1-201ENST00000565862 3754 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 RNU6-1266P-201ENST00000362794 105 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 SNORD87-201ENST00000364849 89 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 Y_RNA.338-201ENST00000365320 114 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 RNU6-325P-201ENST00000411132 105 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 AL445305.1-201ENST00000432577 575 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 AL603825.1-201ENST00000438481 80 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 MTND1P27-201ENST00000451117 902 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 TPT1P7-201ENST00000458300 517 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 RNU7-94P-201ENST00000459576 63 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 RPL23AP75-201ENST00000491601 451 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.58□□□□□ -2.32
VAPAQ9P0L0 TRMT112P2-201ENST00000512910 132 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 RNU6-430P-201ENST00000517078 107 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms