Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 MIR7157-201ENST00000635801 60 ntBASIC2.92□□□□□ -1.94
KCMF1Q9P0J7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.92□□□□□ -1.94
KCMF1Q9P0J7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KCMF1Q9P0J7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
KCMF1Q9P0J7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 AC010329.5-201ENST00000623497 2174 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 SNORD115-30-201ENST00000364117 82 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 SNORA51.4-201ENST00000364993 124 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 SNORA54-201ENST00000384281 123 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 Y_RNA.555-201ENST00000384673 110 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 MIR586-201ENST00000385035 97 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 AL031003.1-201ENST00000404229 172 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 AC024067.1-201ENST00000426199 223 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 MICF-203ENST00000432679 129 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 SUMO1P3-201ENST00000439961 304 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 SNORD2.1-201ENST00000458762 69 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 AC107393.1-201ENST00000512403 346 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 RNA5SP341-201ENST00000516261 117 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 AP002392.1-201ENST00000537692 208 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 AC010620.2-201ENST00000600135 313 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 AC073349.3-201ENST00000617616 186 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 snoU18.1-201ENST00000629629 71 ntBASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.91□□□□□ -1.94
KCMF1Q9P0J7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.9□□□□□ -1.94
KCMF1Q9P0J7 AC080128.1-201ENST00000474389 1917 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 MIR422A-201ENST00000362286 90 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 SNORA68.1-201ENST00000364537 132 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 RNU6-234P-201ENST00000365229 104 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 SNORD21-201ENST00000383953 95 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 RNU6-1248P-201ENST00000391096 64 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 AL603908.1-201ENST00000406098 201 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 U6atac.2-201ENST00000408644 118 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 RN7SKP220-201ENST00000410611 288 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 AC244505.4-201ENST00000434905 287 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 SSXP5-201ENST00000443473 287 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 HMGN2P9-201ENST00000476875 229 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 SRIP1-201ENST00000489235 288 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 MIR4325-201ENST00000583049 90 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 Z83818.1-201ENST00000603584 150 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 AC069294.1-201ENST00000608397 350 ntBASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
KCMF1Q9P0J7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 AC073325.2-201ENST00000339545 159 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 RNU6-923P-201ENST00000364753 107 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 RNU6-47P-201ENST00000383866 107 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 RNU6-1062P-201ENST00000383908 107 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 MIR1283-1-201ENST00000408494 87 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 BTF3P11-201ENST00000426582 477 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 RN7SL20P-201ENST00000488827 297 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 ATP5EP1-201ENST00000510257 156 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 AC008885.1-201ENST00000514930 301 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 RNY3P16-201ENST00000516338 101 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 RNU6-965P-201ENST00000516721 96 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 AL365434.2-201ENST00000607979 234 ntBASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
KCMF1Q9P0J7 RNU6-1272P-201ENST00000362776 107 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 RNU6-1020P-201ENST00000363684 107 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 RNU6-211P-201ENST00000384047 107 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 COX6CP10-201ENST00000416832 224 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 AC023141.11-201ENST00000508864 202 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 AC109329.2-201ENST00000519658 482 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 AC022559.1-201ENST00000520905 205 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 MIR4753-201ENST00000585119 83 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 U6.115-201ENST00000636045 103 ntBASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
KCMF1Q9P0J7 MIR22-201ENST00000362190 85 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 Y_RNA.308-201ENST00000365043 101 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 RNU6-886P-201ENST00000384319 105 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 SNORA46-201ENST00000384762 135 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 MIR300-201ENST00000401138 83 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 FO393413.1-201ENST00000402892 195 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 AL139095.1-201ENST00000404326 391 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 MIR1185-2-201ENST00000408687 86 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 AL139281.1-201ENST00000422120 335 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 MTND2P29-201ENST00000438595 412 ntBASIC2.87□□□□□ -1.95
KCMF1Q9P0J7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms