Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 Y_RNA.568-201ENST00000384742 113 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 RNU6-578P-201ENST00000390980 103 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 HMGN2P8-201ENST00000391458 268 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 AL355497.1-201ENST00000406262 551 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 EBAG9P1-201ENST00000418955 543 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 AC006989.1-201ENST00000427212 131 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 AL162725.1-201ENST00000435405 301 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 CR769767.1-201ENST00000436337 346 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 SNORA70.12-201ENST00000516084 153 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 AC026333.2-201ENST00000542164 106 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 MIR4765-201ENST00000585007 77 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 AC099778.2-201ENST00000610904 211 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.802-201ENST00000614892 130 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.778-201ENST00000620203 90 ntBASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TMEM39AQ9NV64 AC006504.1-201ENST00000562493 3666 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.24-201ENST00000362508 103 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 RNU6-151P-201ENST00000364158 107 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 SNORA51.4-201ENST00000364993 124 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 Y_RNA.572-201ENST00000384757 98 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 MIR29B2-201ENST00000385055 81 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 RNU6-239P-201ENST00000390990 99 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 RNU7-141P-201ENST00000459304 62 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 AL049830.2-201ENST00000480072 201 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 RPS27P26-201ENST00000494583 239 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 AC008885.1-201ENST00000514930 301 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 MIR3684-201ENST00000579779 74 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 AC103810.1-201ENST00000579873 453 ntBASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TMEM39AQ9NV64 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 RNU6-818P-201ENST00000364837 108 ntBASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 MIR1185-2-201ENST00000408687 86 ntBASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 AC009414.1-201ENST00000427200 443 ntBASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 AL353705.1-201ENST00000433468 480 ntBASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 HMGN2P9-201ENST00000476875 229 ntBASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 AC025754.2-201ENST00000606491 432 ntBASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.59□□□□□ -1.83
TMEM39AQ9NV64 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TMEM39AQ9NV64 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 RNU6-1205P-201ENST00000363625 106 ntBASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 RNA5SP112-201ENST00000515937 99 ntBASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 MIR4431-201ENST00000579990 94 ntBASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 AC090616.3-201ENST00000582184 217 ntBASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 AC068647.1-201ENST00000489539 2265 ntBASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEM39AQ9NV64 GABRG2-229ENST00000641017 3628 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 RNU6-969P-201ENST00000383900 105 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 RNU6-959P-201ENST00000384671 107 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 AL357552.1-201ENST00000445254 415 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 RNU7-170P-201ENST00000459303 61 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 MIR449C-201ENST00000516047 92 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 RNU6-426P-201ENST00000516464 97 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 SNORA70.19-201ENST00000516717 90 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 RNU6-711P-201ENST00000517255 106 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 AC104984.5-201ENST00000586878 94 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 AC013412.1-201ENST00000610687 192 ntBASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM39AQ9NV64 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 SNORA14A-201ENST00000364773 135 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 MIR526A2-201ENST00000390198 65 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 SNORA48.8-201ENST00000391324 134 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 AL139095.1-201ENST00000404326 391 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 RNU7-14P-201ENST00000459331 62 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 SCARNA8-201ENST00000515924 131 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 RNU6-1007P-201ENST00000516586 107 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 RNU7-121P-201ENST00000516604 62 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 RNU6-453P-201ENST00000516819 85 ntBASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM39AQ9NV64 UBL5P2-201ENST00000583788 219 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms