Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MIR4778-201ENST00000577635 80 ntBASIC0.3□□□□□ -2.36
CISHQ9NSE2 MIR4703-201ENST00000577728 79 ntBASIC0.3□□□□□ -2.36
CISHQ9NSE2 Z83818.1-201ENST00000603584 150 ntBASIC0.3□□□□□ -2.36
CISHQ9NSE2 AC242498.1-201ENST00000604134 111 ntBASIC0.3□□□□□ -2.36
CISHQ9NSE2 AC242852.1-201ENST00000612151 96 ntBASIC0.3□□□□□ -2.36
CISHQ9NSE2 AC243994.1-201ENST00000618627 109 ntBASIC0.3□□□□□ -2.36
CISHQ9NSE2 AC244015.1-201ENST00000622301 99 ntBASIC0.3□□□□□ -2.36
CISHQ9NSE2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.3□□□□□ -2.36
CISHQ9NSE2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CISHQ9NSE2 AP000568.1-201ENST00000282964 442 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.29□□□□□ -2.36
CISHQ9NSE2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CISHQ9NSE2 MIR320B2-201ENST00000408479 138 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 Y_RNA.598-201ENST00000410480 95 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 AL008987.1-201ENST00000415528 237 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 AC092423.1-201ENST00000430165 186 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 U7.7-201ENST00000459276 60 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 AC025465.4-201ENST00000513422 638 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 RNU7-99P-201ENST00000516271 62 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 RNU6-323P-201ENST00000521915 107 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 AP002001.1-203ENST00000534002 267 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.29□□□□□ -2.36
CISHQ9NSE2 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.29□□□□□ -2.36
CISHQ9NSE2 SUB1P2-201ENST00000556401 297 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 MIR3682-201ENST00000581338 84 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 BNIP3P39-201ENST00000601077 554 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 MIR98-201ENST00000606724 119 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 AC004832.4-201ENST00000608952 331 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 AL391903.3-201ENST00000612158 163 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 AC007671.2-201ENST00000637344 619 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CISHQ9NSE2 AC134026.1-201ENST00000623249 2239 ntBASIC0.29□□□□□ -2.36
CISHQ9NSE2 RNU6-227P-201ENST00000362865 103 ntBASIC0.28□□□□□ -2.36
CISHQ9NSE2 RNU5F-7P-201ENST00000363696 115 ntBASIC0.28□□□□□ -2.36
CISHQ9NSE2 RNA5SP494-201ENST00000410653 129 ntBASIC0.28□□□□□ -2.36
CISHQ9NSE2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.28□□□□□ -2.36
CISHQ9NSE2 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.28□□□□□ -2.36
CISHQ9NSE2 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.28□□□□□ -2.36
CISHQ9NSE2 RN7SKP12-201ENST00000516275 143 ntBASIC0.28□□□□□ -2.36
CISHQ9NSE2 RNU6-344P-201ENST00000516635 111 ntBASIC0.28□□□□□ -2.36
CISHQ9NSE2 RNU6-612P-201ENST00000516909 102 ntBASIC0.28□□□□□ -2.36
CISHQ9NSE2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.28□□□□□ -2.36
CISHQ9NSE2 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.28□□□□□ -2.36
CISHQ9NSE2 AC006566.1-201ENST00000608943 513 ntBASIC0.28□□□□□ -2.36
CISHQ9NSE2 AC139792.3-201ENST00000623525 224 ntBASIC0.28□□□□□ -2.36
CISHQ9NSE2 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
CISHQ9NSE2 RNU6-1286P-201ENST00000383871 107 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 RNU6-424P-201ENST00000384367 105 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 RNU6-1105P-201ENST00000384774 107 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 RNU6-1237P-201ENST00000384777 107 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 SNORD89-201ENST00000390981 114 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 SNORD99-201ENST00000408612 74 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.27□□□□□ -2.37
CISHQ9NSE2 RPS29P15-201ENST00000458329 171 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 LINC01399-202ENST00000458450 244 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 RPS29P27-201ENST00000463711 170 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 AC092989.1-201ENST00000481235 277 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 AC022868.1-201ENST00000517767 391 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 U6.73-201ENST00000619194 103 ntBASIC0.27□□□□□ -2.37
CISHQ9NSE2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
CISHQ9NSE2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
CISHQ9NSE2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.26□□□□□ -2.37
CISHQ9NSE2 MIR513B-201ENST00000385136 84 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 RNU6-1186P-201ENST00000410429 97 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 RPS3AP3-201ENST00000411933 242 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 AC106883.1-201ENST00000418805 562 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.26□□□□□ -2.37
CISHQ9NSE2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.26□□□□□ -2.37
CISHQ9NSE2 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.26□□□□□ -2.37
CISHQ9NSE2 STAG3L5P-204ENST00000443759 179 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.26□□□□□ -2.37
CISHQ9NSE2 RPS20P10-201ENST00000451209 253 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.26□□□□□ -2.37
CISHQ9NSE2 SCARNA18-201ENST00000459004 134 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 RNU7-167P-201ENST00000459160 62 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 UBE2V1P12-201ENST00000503954 474 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 RPL39P5-202ENST00000512505 151 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 RNU6-430P-201ENST00000517078 107 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 MTND2P32-201ENST00000521584 1038 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 AC004223.2-201ENST00000590309 544 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 RNU6-85P-201ENST00000605989 107 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.26□□□□□ -2.37
CISHQ9NSE2 AP000240.1-201ENST00000609910 452 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 TUSC7.1-201ENST00000610969 165 ntBASIC0.26□□□□□ -2.37
CISHQ9NSE2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
CISHQ9NSE2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CISHQ9NSE2 MIR489-201ENST00000384923 84 ntBASIC0.25□□□□□ -2.37
CISHQ9NSE2 MIR1-2-201ENST00000384961 85 ntBASIC0.25□□□□□ -2.37
CISHQ9NSE2 RNA5SP511-201ENST00000410487 115 ntBASIC0.25□□□□□ -2.37
CISHQ9NSE2 RNA5SP504-201ENST00000410676 117 ntBASIC0.25□□□□□ -2.37
CISHQ9NSE2 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.25□□□□□ -2.37
CISHQ9NSE2 UBE2D3P4-201ENST00000441973 436 ntBASIC0.25□□□□□ -2.37
CISHQ9NSE2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.25□□□□□ -2.37
CISHQ9NSE2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.25□□□□□ -2.37
CISHQ9NSE2 RNU6-1110P-201ENST00000516462 101 ntBASIC0.25□□□□□ -2.37
CISHQ9NSE2 AC027419.1-201ENST00000522976 328 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms