Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-245P-201ENST00000384020 107 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 MIR586-201ENST00000385035 97 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-159P-201ENST00000391080 106 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-57P-201ENST00000411348 103 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RN7SKP101-201ENST00000411376 320 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 PDCL2P1-201ENST00000419302 352 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 NCOR1P3-201ENST00000420479 303 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RN7SKP210-201ENST00000459176 261 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RNU7-57P-201ENST00000459540 60 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 AC114982.1-201ENST00000469402 321 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 AC011406.1-201ENST00000512440 370 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-948P-201ENST00000516374 107 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 SNORA25.15-201ENST00000516487 89 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-344P-201ENST00000516635 111 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 SNORA31.17-201ENST00000516953 127 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 AC134698.4-201ENST00000523451 826 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 MIR4713-201ENST00000582691 75 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 SNORD11B-201ENST00000607707 90 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 AC005014.2-201ENST00000607795 599 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 AC005296.1-201ENST00000616145 209 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 AC126177.8-201ENST00000618339 1015 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 AL078596.1-201ENST00000624856 447 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 AL359697.1-201ENST00000624879 587 ntBASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-1235P-201ENST00000384559 107 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-331P-201ENST00000384724 107 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 RNU4-14P-201ENST00000410858 122 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 MTND3P23-201ENST00000431980 347 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 AL121890.1-201ENST00000435457 205 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-498P-201ENST00000459468 107 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-1198P-201ENST00000516904 67 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.708-201ENST00000516950 96 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-1213P-201ENST00000517075 94 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 MIR5695-201ENST00000579717 85 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 AC008873.1-201ENST00000625051 138 ntBASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.106-201ENST00000363189 100 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 RNU6-112P-201ENST00000363599 104 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 RNU1-96P-201ENST00000364163 162 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 RNU6-593P-201ENST00000364716 112 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 Y_RNA.404-201ENST00000383978 102 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 Y_RNA.415-201ENST00000384012 112 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 MIR10B-201ENST00000385011 110 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 AL117342.1-201ENST00000404861 406 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 USMG5P1-201ENST00000425964 177 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 AC091179.3-201ENST00000474761 144 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 RNU2-34P-201ENST00000516534 121 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 Y_RNA.706-201ENST00000516933 99 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 GNAI2P1-201ENST00000541815 315 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 AC010900.2-201ENST00000604508 210 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 AC103810.8-201ENST00000607347 118 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 MIR8081-201ENST00000611533 95 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 uc_338.5-201ENST00000611839 155 ntBASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
EXOSC3Q9NQT5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 MTND5P10-201ENST00000603719 1809 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 SNORA33-201ENST00000363664 130 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 SNORD81.2-201ENST00000365153 76 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 Y_RNA.390-201ENST00000383932 102 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 Y_RNA.482-201ENST00000384377 111 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 MIR548B-201ENST00000385247 97 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 FGF7P8-201ENST00000402994 292 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 MIR1289-2-201ENST00000408360 111 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 HSPE1P21-201ENST00000438283 308 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 RBMX2P4-201ENST00000441256 376 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 AC074290.1-201ENST00000448883 135 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 RPL31P58-201ENST00000469001 379 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 AK6P2-201ENST00000549020 471 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 MZT1P2-201ENST00000604387 248 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 AC069114.2-201ENST00000604699 304 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 AC100812.1-201ENST00000607622 580 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 PISRT1.1-201ENST00000616930 107 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 AL359757.2-201ENST00000624309 274 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 AC068205.3-201ENST00000636385 468 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 TPTEP1-208ENST00000636884 213 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 AC006026.1-201ENST00000444025 1803 ntBASIC1.45□□□□□ -2.18
EXOSC3Q9NQT5 MTND5P16-201ENST00000460269 1703 ntBASIC1.44□□□□□ -2.18
EXOSC3Q9NQT5 RNU1-62P-201ENST00000362599 164 ntBASIC1.44□□□□□ -2.18
EXOSC3Q9NQT5 RNU6-137P-201ENST00000363680 108 ntBASIC1.44□□□□□ -2.18
EXOSC3Q9NQT5 RNU6-280P-201ENST00000364145 104 ntBASIC1.44□□□□□ -2.18
EXOSC3Q9NQT5 RNU6-793P-201ENST00000384233 104 ntBASIC1.44□□□□□ -2.18
EXOSC3Q9NQT5 Y_RNA.490-201ENST00000384413 102 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms