Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC093783.1-201ENST00000612976 329 ntBASIC1.34□□□□□ -2.19
POLR1EQ9GZS1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.34□□□□□ -2.19
POLR1EQ9GZS1 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
POLR1EQ9GZS1 ZNF204P-201ENST00000416749 2397 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 RNU1-62P-201ENST00000362599 164 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 Y_RNA.135-201ENST00000363439 95 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 Y_RNA.212-201ENST00000364177 102 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 SNORA72.2-201ENST00000365028 127 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 RNU6-975P-201ENST00000384296 105 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 SNORA67.2-201ENST00000384300 149 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 Y_RNA.530-201ENST00000384587 101 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 BTF3P4-201ENST00000418852 495 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 AL353572.1-201ENST00000442490 417 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 AC073910.1-201ENST00000445047 438 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 PCMTD1P1-201ENST00000455560 355 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 MTCO2P30-201ENST00000503662 364 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 AC105313.1-201ENST00000509121 353 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 AC109635.3-201ENST00000529536 185 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 AC005668.1-201ENST00000571142 476 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 AL355802.3-201ENST00000607571 545 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 MIR338-201ENST00000636369 67 ntBASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
POLR1EQ9GZS1 SNORA33-201ENST00000363664 130 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 SNORA7.1-201ENST00000363750 139 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 Y_RNA.414-201ENST00000384011 101 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 MIR181A1-201ENST00000385026 110 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 ZNF885P-201ENST00000420174 1098 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 RPS26P45-201ENST00000471748 340 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 RNU6-237P-201ENST00000515985 71 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 AP003033.1-201ENST00000527244 415 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 AC019288.1-201ENST00000557918 224 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 TPRKBP2-201ENST00000565969 475 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 MIR4709-201ENST00000577272 72 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 MIR3942-201ENST00000585264 109 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 SNRPGP20-201ENST00000604477 205 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 AC090617.10-201ENST00000624308 134 ntBASIC1.32□□□□□ -2.2
POLR1EQ9GZS1 RNY4P14-201ENST00000363656 96 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 Y_RNA.402-201ENST00000383972 102 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 RNU6-1235P-201ENST00000384559 107 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 MIR517A-201ENST00000385001 87 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 RNA5SP504-201ENST00000410676 117 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 RNU6-1148P-201ENST00000410992 104 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 RNU7-34P-201ENST00000459394 64 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 RNU6-498P-201ENST00000459468 107 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 AL163195.1-201ENST00000496941 348 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 TRBVA-201ENST00000498804 316 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 AC015688.6-201ENST00000577737 104 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 POLR3GP2-201ENST00000588366 668 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 AC137590.2-201ENST00000619709 240 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 MTND4P5-201ENST00000435821 1374 ntBASIC1.31□□□□□ -2.2
POLR1EQ9GZS1 Y_RNA.3-201ENST00000362331 103 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 SNORA25.8-201ENST00000364831 128 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 SNORD116-11-201ENST00000383882 92 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 MIR32-201ENST00000384965 70 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 MIR586-201ENST00000385035 97 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 RPL30P7-201ENST00000479312 323 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 RNU6-720P-201ENST00000516363 108 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 MTND1P5-201ENST00000517906 940 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 EIF1P4-201ENST00000572664 335 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 AC012557.2-201ENST00000605919 418 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.3□□□□□ -2.2
POLR1EQ9GZS1 Y_RNA.100-201ENST00000363141 102 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 RNU6-623P-201ENST00000363143 105 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 RNU6-306P-201ENST00000384617 107 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 MIR515-2-201ENST00000384883 83 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 MIR515-1-201ENST00000384884 83 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 MIR1253-201ENST00000408273 105 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 MIR320B2-201ENST00000408479 138 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 AC016909.1-201ENST00000415916 166 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 EIF1P1-201ENST00000421436 341 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 SNX2P2-201ENST00000424553 323 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 AL445305.1-201ENST00000432577 575 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 HMGN2P34-201ENST00000437647 269 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 RNU7-57P-201ENST00000459540 60 ntBASIC1.29□□□□□ -2.2
POLR1EQ9GZS1 RNU1-117P-201ENST00000517041 158 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms