Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCSER1Q9C0I3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 MIR378A-201ENST00000362177 66 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 RNU6-112P-201ENST00000363599 104 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 Y_RNA.279-201ENST00000364763 95 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 RNU6-338P-201ENST00000383888 105 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 RNU6-767P-201ENST00000384132 107 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 RNU6-174P-201ENST00000410406 106 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 RPL21P111-201ENST00000418453 477 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 Z82205.1-201ENST00000428456 297 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 AL357134.1-201ENST00000445848 426 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 HSPE1P24-201ENST00000450782 238 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 snoU13.6-201ENST00000458785 104 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 RNU7-95P-201ENST00000459222 64 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 RPL31P58-201ENST00000469001 379 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 AC010409.1-201ENST00000487382 476 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 AF186996.7-201ENST00000492781 209 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 Y_RNA.682-201ENST00000516457 100 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 RNU2-34P-201ENST00000516534 121 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 AC134698.4-201ENST00000523451 826 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 AC026470.2-201ENST00000561492 181 ntBASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCSER1Q9C0I3 AL159152.1-201ENST00000635019 2587 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 Y_RNA.160-201ENST00000363677 92 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 RNU6-596P-201ENST00000365395 98 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 RNU6-306P-201ENST00000384617 107 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 MIR520A-201ENST00000384862 85 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 MT-TL1-201ENST00000386347 75 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 RNU6-1093P-201ENST00000391194 107 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 MIR1267-201ENST00000408723 78 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 AC069257.2-201ENST00000441819 155 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 RN7SKP210-201ENST00000459176 261 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 RPL23AP75-201ENST00000491601 451 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 MTND5P5-201ENST00000503764 376 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 RNU6-507P-201ENST00000516045 100 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 RNA5SP61-201ENST00000516453 100 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 RNU1-54P-201ENST00000517181 120 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 MIR4498-201ENST00000577599 66 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 snoU13.31-201ENST00000607291 104 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 AC083806.3-201ENST00000614016 455 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 AC137590.2-201ENST00000619709 240 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 SCARNA4-201ENST00000629045 128 ntBASIC1.58□□□□□ -2.16
CCSER1Q9C0I3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CCSER1Q9C0I3 RNU6-876P-201ENST00000391295 104 ntBASIC1.57□□□□□ -2.16
CCSER1Q9C0I3 MIR548K-201ENST00000408406 116 ntBASIC1.57□□□□□ -2.16
CCSER1Q9C0I3 PDCL2P1-201ENST00000419302 352 ntBASIC1.57□□□□□ -2.16
CCSER1Q9C0I3 SNRPGP13-201ENST00000442212 177 ntBASIC1.57□□□□□ -2.16
CCSER1Q9C0I3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.57□□□□□ -2.16
CCSER1Q9C0I3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.57□□□□□ -2.16
CCSER1Q9C0I3 PRDX4P1-201ENST00000507189 574 ntBASIC1.57□□□□□ -2.16
CCSER1Q9C0I3 MIR6128-201ENST00000615528 109 ntBASIC1.57□□□□□ -2.16
CCSER1Q9C0I3 RNU6-845P-201ENST00000362578 103 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 Y_RNA.166-201ENST00000363730 102 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 Y_RNA.184-201ENST00000363884 108 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 RNU4-9P-201ENST00000364951 139 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 RNU6-439P-201ENST00000384188 106 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 RNU2-7P-201ENST00000410794 178 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 RNU4-14P-201ENST00000410858 122 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 SNORD5.1-201ENST00000458800 75 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 AC116353.2-201ENST00000505332 712 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 RNA5SP481-201ENST00000516814 122 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 RNU7-30P-201ENST00000516835 62 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 SUB1P3-201ENST00000564581 315 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 MIR5696-201ENST00000578474 85 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 AP001485.1-201ENST00000604799 199 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 AC022513.1-201ENST00000624512 117 ntBASIC1.56□□□□□ -2.16
CCSER1Q9C0I3 MIR340-201ENST00000362125 95 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 RNU6-593P-201ENST00000364716 112 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 Y_RNA.339-201ENST00000365325 102 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 RNU6-360P-201ENST00000390944 104 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 MIR548F5-201ENST00000408421 86 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 AC074085.1-201ENST00000413598 418 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 USP9YP30-201ENST00000430729 455 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 MTATP6P23-201ENST00000440153 476 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 AC074290.1-201ENST00000448883 135 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 AC007215.1-201ENST00000464893 276 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 AC114982.1-201ENST00000469402 321 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 FO393415.2-201ENST00000480085 343 ntBASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.55□□□□□ -2.16
CCSER1Q9C0I3 AL161670.1-201ENST00000554348 137 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms