Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 EIF1P2-201ENST00000428233 350 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 AC096638.1-201ENST00000444678 216 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 MTCO3P8-201ENST00000453691 755 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 MIR2053-201ENST00000459295 91 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 AC093259.1-201ENST00000509755 300 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 MIR449C-201ENST00000516047 92 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 RNU6-120P-201ENST00000516077 103 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 SNORA25.14-201ENST00000516481 132 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 RNU6-911P-201ENST00000516523 104 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 RNA5SP137-201ENST00000516833 135 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 RNU6-699P-201ENST00000517081 110 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 SNORD116.3-201ENST00000517176 78 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 DEFB131C-201ENST00000528817 165 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 MIR3126-201ENST00000577443 74 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 AC087588.2-201ENST00000617667 426 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 AC090971.5-201ENST00000621102 293 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 SCARNA15.3-201ENST00000626315 122 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 SCARNA4.1-201ENST00000628597 123 ntBASIC1.75□□□□□ -2.13
CCDC28BQ9BUN5 ZNF702P-202ENST00000434269 1966 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 Y_RNA.99-201ENST00000363138 105 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 RNU6-873P-201ENST00000363833 107 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 RNU6-1026P-201ENST00000384465 108 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 AC018865.2-201ENST00000423631 129 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 AC245102.2-201ENST00000448956 180 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 HMGN2P18-201ENST00000450680 270 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 AL137159.1-201ENST00000452808 512 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 PRELID3BP1-201ENST00000457142 540 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 RNU7-14P-201ENST00000459331 62 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 SNORA4.4-201ENST00000515921 135 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 RNA5SP490-201ENST00000517141 136 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 CYCSP23-201ENST00000519781 313 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 MIR1244-1-201ENST00000612829 85 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 AL359314.1-201ENST00000616913 261 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 MIR1244-3-201ENST00000635744 85 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 MIR1244-2-201ENST00000636449 85 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 MIR1244-4-202ENST00000636813 85 ntBASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
CCDC28BQ9BUN5 Y_RNA.5-201ENST00000362334 102 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 RNU4-76P-201ENST00000364509 141 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 Y_RNA.332-201ENST00000365271 113 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 Y_RNA.358-201ENST00000365491 99 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 RNU6-438P-201ENST00000365561 103 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 RNU6-281P-201ENST00000384212 103 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 Y_RNA.557-201ENST00000384680 107 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 SNORA40.19-201ENST00000390846 128 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 Y_RNA.592-201ENST00000410274 109 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 AC114482.1-201ENST00000418010 247 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 MRPS18CP6-201ENST00000423587 223 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 AC096920.1-201ENST00000423991 241 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 AL137792.2-201ENST00000443484 235 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 AC016925.1-201ENST00000458303 298 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 RNU7-87P-201ENST00000459343 62 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 AC105758.1-201ENST00000506038 399 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 ATP5EP1-201ENST00000510257 156 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 AC023442.1-201ENST00000531247 422 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 SNORD11B-201ENST00000607707 90 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 AL138825.1-201ENST00000618587 192 ntBASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CCDC28BQ9BUN5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 RNU6-222P-201ENST00000362438 107 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 Y_RNA.314-201ENST00000365114 102 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 RNU6-793P-201ENST00000384233 104 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 MIR586-201ENST00000385035 97 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 MIR29C-201ENST00000385231 88 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 AC123900.1-201ENST00000420390 96 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 AC007395.1-201ENST00000451333 677 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 AC087441.2-201ENST00000529141 262 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 UBL5P4-201ENST00000562584 236 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 MIR5695-201ENST00000579717 85 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 AC010999.1-201ENST00000611856 324 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 uc_338.22-201ENST00000622722 187 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 AC008873.1-201ENST00000625051 138 ntBASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC28BQ9BUN5 Y_RNA.179-201ENST00000363844 90 ntBASIC1.71□□□□□ -2.14
CCDC28BQ9BUN5 RNU6-743P-201ENST00000364151 106 ntBASIC1.71□□□□□ -2.14
CCDC28BQ9BUN5 RNU4-42P-201ENST00000364738 142 ntBASIC1.71□□□□□ -2.14
CCDC28BQ9BUN5 SNORD14D-201ENST00000384390 87 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms