Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 Y_RNA.460-201ENST00000384255 102 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-738P-201ENST00000384531 106 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 SNORA11.4-201ENST00000408823 129 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 RN7SKP192-201ENST00000411291 327 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-1114P-201ENST00000516022 107 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 RNVU1-2-201ENST00000516326 135 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-264P-201ENST00000517134 104 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 AL109918.3-201ENST00000603072 338 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 AC010999.1-201ENST00000611856 324 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 AC040896.1-201ENST00000613819 479 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 AC098657.3-201ENST00000620434 263 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 AC008873.1-201ENST00000625051 138 ntBASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
HERPUD2Q9BSE4 MTND5P16-201ENST00000460269 1703 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 Y_RNA.146-201ENST00000363549 102 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-727P-201ENST00000363592 107 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 SNORD42.2-201ENST00000365570 69 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 SNORA67.2-201ENST00000384300 149 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 MIR10B-201ENST00000385011 110 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 AL590004.1-201ENST00000405321 300 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 MIR1302-11-201ENST00000408051 138 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 MIR1302-9-201ENST00000408365 138 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 MIR1302-10-201ENST00000408734 138 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-57P-201ENST00000411348 103 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 AL356320.1-201ENST00000429616 163 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 AC092423.1-201ENST00000430165 186 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 TRBV12-1-201ENST00000479785 344 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 RPL17P19-201ENST00000489069 552 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 YWHAEP4-201ENST00000505390 198 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-559P-201ENST00000516151 98 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 RNA5SP281-201ENST00000516504 135 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-1213P-201ENST00000517075 94 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 MIR1302-2-201ENST00000607096 138 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-222P-201ENST00000362438 107 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 Y_RNA.364-201ENST00000365532 101 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 HMGN2P19-201ENST00000425149 265 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 Y_RNA.632-201ENST00000459189 102 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 MRPS17P9-201ENST00000511924 393 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-327P-201ENST00000516270 127 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 AC090617.3-201ENST00000573670 475 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 MIR5094-201ENST00000578766 85 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 MIR3671-201ENST00000580455 88 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 MIR3945-201ENST00000581853 98 ntBASIC2.3□□□□□ -2.04
HERPUD2Q9BSE4 Y_RNA.384-201ENST00000383909 102 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 SNORA70B-201ENST00000384210 135 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 SNORD116-29-201ENST00000384516 83 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 MIR676-201ENST00000390702 67 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 RNU1-139P-201ENST00000391307 165 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 SNORA3.2-201ENST00000408221 125 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 RNA5SP425-201ENST00000410336 112 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 AC060773.1-201ENST00000421698 310 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 MTCO2P12-201ENST00000427426 682 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 AC091179.3-201ENST00000474761 144 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 AC011406.1-201ENST00000512440 370 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 MIR514B-201ENST00000516774 80 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 AL442663.2-201ENST00000554385 511 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 AC004584.2-201ENST00000570407 410 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 MIR3171-201ENST00000584270 74 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 AC133104.2-201ENST00000615272 193 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 AC009831.4-201ENST00000620744 325 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 snoZ196.1-201ENST00000625269 89 ntBASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.29□□□□□ -2.04
HERPUD2Q9BSE4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 SNORA63-201ENST00000363450 132 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-1188P-201ENST00000363795 107 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 SNORD87-201ENST00000364849 89 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 Y_RNA.315-201ENST00000365117 102 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 MIR1253-201ENST00000408273 105 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 RNU6-1045P-201ENST00000516321 107 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 AC093023.1-201ENST00000547375 507 ntBASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.28□□□□□ -2.04
HERPUD2Q9BSE4 AL121655.1-201ENST00000605811 308 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms