Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC134503.1-201ENST00000633048 54 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
EBF4Q9BQW3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
EBF4Q9BQW3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
EBF4Q9BQW3 RNU6-222P-201ENST00000362438 107 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.445-201ENST00000384168 102 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 RNY1P14-201ENST00000384426 108 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 RNU6-1011P-201ENST00000384668 107 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 MIR597-201ENST00000384968 97 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 RNU6-1156P-201ENST00000410365 100 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 SRIP3-201ENST00000413200 219 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AC012306.1-201ENST00000423267 114 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AC005534.2-201ENST00000431047 433 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AL163540.1-201ENST00000485382 386 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.57□□□□□ -2.16
EBF4Q9BQW3 RNU6-1170P-201ENST00000515974 106 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.711-201ENST00000516993 102 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 DEFB131C-201ENST00000528817 165 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 CYP4A27P-201ENST00000567218 190 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AC025754.2-201ENST00000606491 432 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 SNORD58B-201ENST00000607313 66 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AL355802.3-201ENST00000607571 545 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AC040896.1-201ENST00000613819 479 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AL590808.1-201ENST00000618696 141 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AC138305.3-201ENST00000624988 240 ntBASIC1.57□□□□□ -2.16
EBF4Q9BQW3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.56□□□□□ -2.16
EBF4Q9BQW3 AC233981.2-201ENST00000611524 1614 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 U3.9-201ENST00000363823 204 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 RNU4-56P-201ENST00000364700 142 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 RNU4-42P-201ENST00000364738 142 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 RNU6-968P-201ENST00000384076 107 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.431-201ENST00000384086 102 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 SNORA12.2-201ENST00000391040 156 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.645-201ENST00000391229 102 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 MIR208B-201ENST00000401172 77 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 MIR548P-201ENST00000408336 84 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 EIF4EP2-201ENST00000422816 654 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 AL353689.1-201ENST00000438895 199 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 HMGN2P18-201ENST00000450680 270 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 RNU7-169P-201ENST00000459456 61 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.631-201ENST00000459607 101 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.56□□□□□ -2.16
EBF4Q9BQW3 RPL17P19-201ENST00000489069 552 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.56□□□□□ -2.16
EBF4Q9BQW3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 HSBP1P1-201ENST00000555205 166 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 MIR4299-201ENST00000577899 72 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 AC006157.1-201ENST00000611750 366 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 AC005520.5-201ENST00000613926 164 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 ZNF299P-201ENST00000406845 1804 ntBASIC1.56□□□□□ -2.16
EBF4Q9BQW3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
EBF4Q9BQW3 MIR340-201ENST00000362125 95 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.128-201ENST00000363391 112 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 U8.10-201ENST00000384260 133 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 MIR32-201ENST00000384965 70 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 MCFD2P1-201ENST00000417812 300 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AC092423.1-201ENST00000430165 186 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 HMGN2P3-201ENST00000433603 273 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.55□□□□□ -2.16
EBF4Q9BQW3 HMGN2P5-201ENST00000436882 273 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AL035666.1-201ENST00000446195 348 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 MTND4P19-201ENST00000446659 478 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AL513124.1-201ENST00000450410 614 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AC087477.1-201ENST00000465747 340 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.55□□□□□ -2.16
EBF4Q9BQW3 RNU4-77P-201ENST00000516692 156 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 RNU6-1098P-201ENST00000516772 96 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 RNA5SP490-201ENST00000517141 136 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.55□□□□□ -2.16
EBF4Q9BQW3 CBX3P4-201ENST00000538909 354 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.55□□□□□ -2.16
EBF4Q9BQW3 UBL5P4-201ENST00000562584 236 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 SUB1P3-201ENST00000564581 315 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.55□□□□□ -2.16
EBF4Q9BQW3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AC091812.1-201ENST00000432235 1948 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 ZNF702P-202ENST00000434269 1966 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 AC092881.1-201ENST00000638218 2733 ntBASIC1.55□□□□□ -2.16
EBF4Q9BQW3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
EBF4Q9BQW3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.28-201ENST00000362554 111 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 RNU6-490P-201ENST00000362985 107 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.106-201ENST00000363189 100 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 SNORD114-6-201ENST00000364393 72 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.252-201ENST00000364556 101 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.314-201ENST00000365114 102 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 SNORA40.18-201ENST00000391200 128 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 AC113618.1-201ENST00000416747 285 ntBASIC1.54□□□□□ -2.16
EBF4Q9BQW3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.54□□□□□ -2.16
EBF4Q9BQW3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 402.6 ms