Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RNU6-859P-201ENST00000362728 107 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 RNU6-626P-201ENST00000363354 107 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 SNORD113-8-201ENST00000363497 74 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 RNU6-525P-201ENST00000363685 104 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 Y_RNA.179-201ENST00000363844 90 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 RNU6-944P-201ENST00000364023 107 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 Y_RNA.286-201ENST00000364813 102 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 SNORA18.2-201ENST00000383865 132 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 RNU6-20P-201ENST00000384106 107 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 RNU6-793P-201ENST00000384233 104 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 Y_RNA.570-201ENST00000384750 101 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VGLL1Q99990 Z92545.1-201ENST00000411782 234 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 AC027124.2-201ENST00000428249 105 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 IFNA11P-201ENST00000446352 526 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 RPS23P5-201ENST00000495419 428 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 HMGB3P3-201ENST00000510526 400 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 AC096725.1-201ENST00000514266 313 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 RNU6-1271P-201ENST00000517049 105 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 AC012433.1-201ENST00000588916 398 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 AC005562.2-201ENST00000618264 111 ntBASIC1.88□□□□□ -2.11
VGLL1Q99990 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
VGLL1Q99990 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VGLL1Q99990 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
VGLL1Q99990 AC080128.1-201ENST00000474389 1917 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
VGLL1Q99990 MIR335-201ENST00000362173 94 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 RNU6-1026P-201ENST00000384465 108 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 RNU6-1274P-201ENST00000384557 107 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 RNU6-907P-201ENST00000390924 102 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 SNORA48.2-201ENST00000390926 124 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 U6atac.2-201ENST00000408644 118 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 Y_RNA.595-201ENST00000410403 105 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 AC108059.2-201ENST00000434626 151 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 AC004386.2-201ENST00000441858 148 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 AC011753.1-201ENST00000451001 220 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.87□□□□□ -2.11
VGLL1Q99990 AC140059.1-201ENST00000489238 361 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 AC074133.1-201ENST00000515696 183 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 RNU6-344P-201ENST00000516635 111 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 RNU6-794P-201ENST00000517261 64 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.87□□□□□ -2.11
VGLL1Q99990 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.87□□□□□ -2.11
VGLL1Q99990 AC018448.1-201ENST00000552843 316 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 AC027176.1-201ENST00000560204 514 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 AC026470.2-201ENST00000561492 181 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.87□□□□□ -2.11
VGLL1Q99990 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.87□□□□□ -2.11
VGLL1Q99990 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.87□□□□□ -2.11
VGLL1Q99990 SNRPGP20-201ENST00000604477 205 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 AC005000.2-201ENST00000605468 310 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 MIR7106-201ENST00000612419 65 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 TCL6_2.1-201ENST00000615162 119 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 SDR42E1P4-201ENST00000620894 481 ntBASIC1.87□□□□□ -2.11
VGLL1Q99990 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
VGLL1Q99990 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
VGLL1Q99990 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VGLL1Q99990 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.87□□□□□ -2.11
VGLL1Q99990 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.86□□□□□ -2.11
VGLL1Q99990 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VGLL1Q99990 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
VGLL1Q99990 MIR410-201ENST00000362222 80 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 SNORD81.1-201ENST00000363064 77 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 RNU6-727P-201ENST00000363592 107 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 Y_RNA.237-201ENST00000364439 102 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 RNU1-51P-201ENST00000365345 176 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 Y_RNA.350-201ENST00000365409 98 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 Y_RNA.415-201ENST00000384012 112 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 RNU6-1199P-201ENST00000411249 104 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 AC092427.1-202ENST00000430569 476 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 AC009237.7-201ENST00000447357 229 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.86□□□□□ -2.11
VGLL1Q99990 AC090515.1-201ENST00000465295 476 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.86□□□□□ -2.11
VGLL1Q99990 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 RN7SKP132-201ENST00000516001 208 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 SCARNA3-201ENST00000517097 143 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.86□□□□□ -2.11
VGLL1Q99990 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.86□□□□□ -2.11
VGLL1Q99990 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.86□□□□□ -2.11
VGLL1Q99990 LARP7P3-201ENST00000579888 337 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 MIR3200-201ENST00000580767 85 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 MIR3128-201ENST00000581957 66 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.86□□□□□ -2.11
VGLL1Q99990 AC010900.2-201ENST00000604508 210 ntBASIC1.86□□□□□ -2.11
VGLL1Q99990 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VGLL1Q99990 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.85□□□□□ -2.11
VGLL1Q99990 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
VGLL1Q99990 Y_RNA.60-201ENST00000362831 98 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 Y_RNA.101-201ENST00000363154 102 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 RNU5F-3P-201ENST00000363767 117 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 RNA5SP456-201ENST00000364002 114 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 Y_RNA.230-201ENST00000364348 109 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 RNU6-1318P-201ENST00000365389 103 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 Y_RNA.446-201ENST00000384178 104 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 MIR218-1-201ENST00000384999 110 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 MIR29B2-201ENST00000385055 81 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 MIR95-201ENST00000385072 81 ntBASIC1.85□□□□□ -2.11
VGLL1Q99990 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 454 ms