Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 AC100812.1-201ENST00000607622 580 ntBASIC2.05□□□□□ -2.08
PKP2Q99959 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.05□□□□□ -2.08
PKP2Q99959 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.05□□□□□ -2.08
PKP2Q99959 CTSLP2-204ENST00000629029 392 ntBASIC2.05□□□□□ -2.08
PKP2Q99959 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PKP2Q99959 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PKP2Q99959 AP000560.1-201ENST00000624150 1937 ntBASIC2.05□□□□□ -2.08
PKP2Q99959 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
PKP2Q99959 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
PKP2Q99959 RNA5SP289-201ENST00000362332 137 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 SNORD115-3-201ENST00000363100 82 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 SNORD115-32-201ENST00000364079 82 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 Y_RNA.527-201ENST00000384573 102 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 RNU7-169P-201ENST00000459456 61 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 AC087477.1-201ENST00000465747 340 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 AC021146.2-201ENST00000504736 556 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 AC144568.1-201ENST00000520139 137 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 AC115990.1-201ENST00000526957 301 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.04□□□□□ -2.08
PKP2Q99959 AC021231.3-201ENST00000558497 370 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 AL078605.1-201ENST00000603529 500 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 AC136443.5-201ENST00000603741 370 ntBASIC2.04□□□□□ -2.08
PKP2Q99959 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
PKP2Q99959 RNU6-17P-201ENST00000384245 107 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 RNU6-18P-201ENST00000384527 107 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 MIR29C-201ENST00000385231 88 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 SNORA69.1-201ENST00000390904 137 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 SNORA46.1-201ENST00000391069 153 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 Y_RNA.592-201ENST00000410274 109 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 Y_RNA.605-201ENST00000410577 105 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 RNA5SP450-201ENST00000411206 102 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 AL590135.1-201ENST00000422215 156 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 AC096920.1-201ENST00000423991 241 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 AC019205.3-201ENST00000424573 156 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 AC016700.2-201ENST00000446011 156 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 PRELID3BP1-201ENST00000457142 540 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.03□□□□□ -2.08
PKP2Q99959 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 TOMM22P6-201ENST00000465035 409 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.03□□□□□ -2.08
PKP2Q99959 AC015911.1-201ENST00000495111 156 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.03□□□□□ -2.08
PKP2Q99959 RNU5F-2P-201ENST00000516066 82 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 RNU6-764P-201ENST00000516396 105 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 RNU6-1046P-201ENST00000516538 107 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 SNORA40.14-201ENST00000516543 86 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 RNU6-965P-201ENST00000516721 96 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 SNORA31.16-201ENST00000516773 139 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 Y_RNA.706-201ENST00000516933 99 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 Y_RNA.720-201ENST00000517166 92 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 AC018630.3-201ENST00000542637 96 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 MIR5188-201ENST00000583467 113 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 RMST_6.1-201ENST00000611980 203 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 AL132822.1-201ENST00000617063 513 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 AL138825.1-201ENST00000618587 192 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 AL353997.5-201ENST00000618886 171 ntBASIC2.03□□□□□ -2.08
PKP2Q99959 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
PKP2Q99959 Y_RNA.106-201ENST00000363189 100 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 Y_RNA.338-201ENST00000365320 114 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 Y_RNA.459-201ENST00000384251 102 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 U8.10-201ENST00000384260 133 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 MIR32-201ENST00000384965 70 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PKP2Q99959 Y_RNA.597-201ENST00000410463 100 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 AC009963.1-201ENST00000417265 157 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.02□□□□□ -2.09
PKP2Q99959 MTND5P22-201ENST00000458380 195 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 AC132942.1-201ENST00000486753 483 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 AC234781.5-201ENST00000508429 271 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 RNA5SP364-201ENST00000516938 78 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 HSBP1P1-201ENST00000555205 166 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.02□□□□□ -2.09
PKP2Q99959 AC006600.1-201ENST00000572529 153 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 MIR3935-201ENST00000583472 104 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 VN1R91P-201ENST00000594377 169 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 Z98751.3-201ENST00000604447 521 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 U2.1-201ENST00000618978 145 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 SNORD98-201ENST00000636377 67 ntBASIC2.02□□□□□ -2.09
PKP2Q99959 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
PKP2Q99959 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.02□□□□□ -2.09
PKP2Q99959 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.01□□□□□ -2.09
PKP2Q99959 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
PKP2Q99959 Y_RNA.389-201ENST00000383924 113 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 Y_RNA.455-201ENST00000384230 98 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 MIR153-2-201ENST00000385225 87 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 RNU6-823P-201ENST00000391042 103 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 RN7SKP223-201ENST00000410582 62 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.01□□□□□ -2.09
PKP2Q99959 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.01□□□□□ -2.09
PKP2Q99959 AC012306.1-201ENST00000423267 114 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 CBX3P6-201ENST00000430257 527 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 HMGN2P3-201ENST00000433603 273 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 HMGN2P5-201ENST00000436882 273 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.01□□□□□ -2.09
PKP2Q99959 AL353689.1-201ENST00000438895 199 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 OR2AQ1P-201ENST00000451972 200 ntBASIC2.01□□□□□ -2.09
PKP2Q99959 snoU13.6-201ENST00000458785 104 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms