Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SNAP23P1-201ENST00000433229 246 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 AC013470.1-201ENST00000453438 462 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 AC144521.1-201ENST00000607148 956 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 AC008250.2-201ENST00000615261 205 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 SNORA33-201ENST00000363664 130 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 MRPL42P3-201ENST00000401492 326 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 SNORA40.8-201ENST00000411034 126 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 RNU2-46P-201ENST00000517038 113 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 AC107934.1-201ENST00000522215 217 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 MIR3192-201ENST00000584920 77 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 AC096720.1-201ENST00000604441 183 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 AL139286.2-201ENST00000606838 396 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 AC122133.1-201ENST00000613964 233 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 AL356596.1-201ENST00000624230 379 ntBASIC-0.31□□□□□ -2.46
CDK5RAP2Q96SN8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.32□□□□□ -2.46
CDK5RAP2Q96SN8 MTND4P3-201ENST00000417829 541 ntBASIC-0.32□□□□□ -2.46
CDK5RAP2Q96SN8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.32□□□□□ -2.46
CDK5RAP2Q96SN8 AL049829.1-201ENST00000465411 156 ntBASIC-0.32□□□□□ -2.46
CDK5RAP2Q96SN8 AC091874.1-201ENST00000511402 339 ntBASIC-0.32□□□□□ -2.46
CDK5RAP2Q96SN8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
CDK5RAP2Q96SN8 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.32□□□□□ -2.46
CDK5RAP2Q96SN8 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.32□□□□□ -2.46
CDK5RAP2Q96SN8 AL445523.1-201ENST00000451184 1362 ntBASIC-0.32□□□□□ -2.46
CDK5RAP2Q96SN8 RNU6-607P-201ENST00000411283 108 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AC010975.2-201ENST00000427781 588 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AC079382.1-201ENST00000493346 557 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 MTND3P25-201ENST00000509243 135 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AP001372.4-201ENST00000524889 472 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AC112693.2-201ENST00000556538 232 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 MIR548AX-201ENST00000580117 73 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AC006927.2-201ENST00000639256 389 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 SNORA2B-201ENST00000384583 137 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AL031779.1-201ENST00000415663 330 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AC010469.2-201ENST00000496412 480 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 AP003716.2-201ENST00000528260 108 ntBASIC-0.33□□□□□ -2.46
CDK5RAP2Q96SN8 MIR1-1-201ENST00000362147 71 ntBASIC-0.34□□□□□ -2.46
CDK5RAP2Q96SN8 RNU6-552P-201ENST00000362869 119 ntBASIC-0.34□□□□□ -2.46
CDK5RAP2Q96SN8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
CDK5RAP2Q96SN8 RNU7-12P-201ENST00000516030 62 ntBASIC-0.34□□□□□ -2.46
CDK5RAP2Q96SN8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
CDK5RAP2Q96SN8 MIR544B-201ENST00000582372 78 ntBASIC-0.34□□□□□ -2.46
CDK5RAP2Q96SN8 AC121334.2-201ENST00000605387 271 ntBASIC-0.34□□□□□ -2.46
CDK5RAP2Q96SN8 AL096861.1-201ENST00000610899 123 ntBASIC-0.34□□□□□ -2.46
CDK5RAP2Q96SN8 RNU6-674P-201ENST00000363831 107 ntBASIC-0.35□□□□□ -2.46
CDK5RAP2Q96SN8 MIR635-201ENST00000384830 98 ntBASIC-0.35□□□□□ -2.46
CDK5RAP2Q96SN8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.35□□□□□ -2.46
CDK5RAP2Q96SN8 MTND4LP25-201ENST00000570218 163 ntBASIC-0.35□□□□□ -2.46
CDK5RAP2Q96SN8 AC234772.3-201ENST00000602277 528 ntBASIC-0.35□□□□□ -2.46
CDK5RAP2Q96SN8 MTND3P19-201ENST00000603825 345 ntBASIC-0.35□□□□□ -2.46
CDK5RAP2Q96SN8 AC072039.2-201ENST00000608883 439 ntBASIC-0.35□□□□□ -2.46
CDK5RAP2Q96SN8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.35□□□□□ -2.46
CDK5RAP2Q96SN8 uc_338.16-201ENST00000621804 95 ntBASIC-0.35□□□□□ -2.46
CDK5RAP2Q96SN8 RNU6-723P-201ENST00000383973 107 ntBASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 SNORA12.1-201ENST00000390873 148 ntBASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 RPS29P13-201ENST00000402041 169 ntBASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 RNU4-63P-201ENST00000411313 118 ntBASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 RNU6-57P-201ENST00000411348 103 ntBASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 snoU13.11-201ENST00000459219 104 ntBASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 AC008628.2-201ENST00000502605 298 ntBASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 MIR4743-201ENST00000584576 69 ntBASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.35□□□□□ -2.47
CDK5RAP2Q96SN8 RNU6-428P-201ENST00000362942 107 ntBASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 MIR520G-201ENST00000385064 90 ntBASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 MIR520H-201ENST00000385126 88 ntBASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 MIR643-201ENST00000385267 97 ntBASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 RBBP4P6-201ENST00000508098 202 ntBASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 SCARNA8-201ENST00000515924 131 ntBASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 AC109479.2-201ENST00000517842 174 ntBASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 AL592221.1-201ENST00000605266 382 ntBASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 AL158042.1-201ENST00000605338 460 ntBASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 AC068792.1-201ENST00000621354 417 ntBASIC-0.36□□□□□ -2.47
CDK5RAP2Q96SN8 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 SNORD114-12-201ENST00000365400 75 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 MIR938-201ENST00000401216 83 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 AL392103.1-201ENST00000447000 198 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 AC023050.3-201ENST00000541142 333 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 AL355073.2-201ENST00000612106 557 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 AL031667.3-201ENST00000620124 655 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 snoZ196.1-201ENST00000625269 89 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 U8.16-201ENST00000391279 133 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 RNU7-57P-201ENST00000459540 60 ntBASIC-0.37□□□□□ -2.47
CDK5RAP2Q96SN8 SNORD118-201ENST00000363593 134 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms