Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNU6-239P-201ENST00000390990 99 ntBASIC3.88□□□□□ -1.79
CALR3Q96L12 BMS1P22-201ENST00000414726 313 ntBASIC3.88□□□□□ -1.79
CALR3Q96L12 AL513477.1-202ENST00000417061 214 ntBASIC3.88□□□□□ -1.79
CALR3Q96L12 AC025750.2-201ENST00000442609 450 ntBASIC3.88□□□□□ -1.79
CALR3Q96L12 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.88□□□□□ -1.79
CALR3Q96L12 AC006483.1-201ENST00000487308 313 ntBASIC3.88□□□□□ -1.79
CALR3Q96L12 AC022695.1-201ENST00000522089 237 ntBASIC3.88□□□□□ -1.79
CALR3Q96L12 MIR6820-201ENST00000611508 62 ntBASIC3.88□□□□□ -1.79
CALR3Q96L12 MIR7153-201ENST00000637758 57 ntBASIC3.88□□□□□ -1.79
CALR3Q96L12 FAM35CP-201ENST00000554755 2470 ntBASIC3.87□□□□□ -1.79
CALR3Q96L12 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
CALR3Q96L12 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CALR3Q96L12 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CALR3Q96L12 RNU6-383P-201ENST00000410864 94 ntBASIC3.87□□□□□ -1.79
CALR3Q96L12 AL353705.1-201ENST00000433468 480 ntBASIC3.87□□□□□ -1.79
CALR3Q96L12 RNU6-856P-201ENST00000516959 98 ntBASIC3.87□□□□□ -1.79
CALR3Q96L12 MIR3117-201ENST00000584034 78 ntBASIC3.87□□□□□ -1.79
CALR3Q96L12 AP001485.1-201ENST00000604799 199 ntBASIC3.87□□□□□ -1.79
CALR3Q96L12 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.87□□□□□ -1.79
CALR3Q96L12 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CALR3Q96L12 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CALR3Q96L12 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CALR3Q96L12 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CALR3Q96L12 RNU4-13P-201ENST00000364019 141 ntBASIC3.86□□□□□ -1.79
CALR3Q96L12 RNU6-117P-201ENST00000365415 107 ntBASIC3.86□□□□□ -1.79
CALR3Q96L12 RNU6-1228P-201ENST00000391014 107 ntBASIC3.86□□□□□ -1.79
CALR3Q96L12 AP001486.1-201ENST00000463339 476 ntBASIC3.86□□□□□ -1.79
CALR3Q96L12 RN7SL323P-201ENST00000494712 295 ntBASIC3.86□□□□□ -1.79
CALR3Q96L12 RPL23AP54-201ENST00000495129 419 ntBASIC3.86□□□□□ -1.79
CALR3Q96L12 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.86□□□□□ -1.79
CALR3Q96L12 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.86□□□□□ -1.79
CALR3Q96L12 AC091826.1-201ENST00000514065 313 ntBASIC3.86□□□□□ -1.79
CALR3Q96L12 AC068647.1-201ENST00000489539 2265 ntBASIC3.86□□□□□ -1.79
CALR3Q96L12 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CALR3Q96L12 AC138915.1-201ENST00000565427 1685 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.85□□□□□ -1.79
CALR3Q96L12 Y_RNA.400-201ENST00000383963 111 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 MIR1253-201ENST00000408273 105 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 RNA5SP511-201ENST00000410487 115 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 AC104332.2-201ENST00000429959 156 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 AL162725.1-201ENST00000435405 301 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.85□□□□□ -1.79
CALR3Q96L12 AC104619.4-201ENST00000510773 249 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 AC107027.2-201ENST00000512197 115 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 RNU6-667P-201ENST00000517186 102 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 AC015720.1-201ENST00000565251 277 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 MIR4438-201ENST00000585271 93 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 AC093732.2-201ENST00000607950 274 ntBASIC3.85□□□□□ -1.79
CALR3Q96L12 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CALR3Q96L12 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.85□□□□□ -1.79
CALR3Q96L12 MT-TT-201ENST00000387460 66 ntBASIC3.84□□□□□ -1.79
CALR3Q96L12 RNA5SP317-201ENST00000410176 116 ntBASIC3.84□□□□□ -1.79
CALR3Q96L12 RNA5SP311-201ENST00000411290 116 ntBASIC3.84□□□□□ -1.79
CALR3Q96L12 RNU6-437P-201ENST00000459408 95 ntBASIC3.84□□□□□ -1.79
CALR3Q96L12 AC018868.1-201ENST00000491307 315 ntBASIC3.84□□□□□ -1.79
CALR3Q96L12 RNA5SP315-201ENST00000516340 116 ntBASIC3.84□□□□□ -1.79
CALR3Q96L12 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
CALR3Q96L12 RNA5SP312-201ENST00000517068 116 ntBASIC3.84□□□□□ -1.79
CALR3Q96L12 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.84□□□□□ -1.79
CALR3Q96L12 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.84□□□□□ -1.79
CALR3Q96L12 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.84□□□□□ -1.79
CALR3Q96L12 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.84□□□□□ -1.79
CALR3Q96L12 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.84□□□□□ -1.79
CALR3Q96L12 AP003355.3-201ENST00000623465 114 ntBASIC3.84□□□□□ -1.79
CALR3Q96L12 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CALR3Q96L12 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CALR3Q96L12 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.83□□□□□ -1.8
CALR3Q96L12 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.83□□□□□ -1.8
CALR3Q96L12 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CALR3Q96L12 RNU1-22P-201ENST00000363334 158 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 RNA5SP125-201ENST00000364843 120 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 Y_RNA.343-201ENST00000365354 112 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 MIR585-201ENST00000384887 94 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 MIR592-201ENST00000384959 97 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 AL606845.1-201ENST00000404881 255 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 AL121914.1-201ENST00000450188 156 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 RN7SL594P-201ENST00000470590 287 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 AC097462.1-201ENST00000514125 324 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 RNU7-121P-201ENST00000516604 62 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 AC107934.2-201ENST00000518653 310 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 AC090616.3-201ENST00000582184 217 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 U2.20-201ENST00000613956 192 ntBASIC3.83□□□□□ -1.8
CALR3Q96L12 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CALR3Q96L12 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CALR3Q96L12 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CALR3Q96L12 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CALR3Q96L12 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.82□□□□□ -1.8
CALR3Q96L12 MIR340-201ENST00000362125 95 ntBASIC3.82□□□□□ -1.8
CALR3Q96L12 RNU6-674P-201ENST00000363831 107 ntBASIC3.82□□□□□ -1.8
CALR3Q96L12 SNORA25B-201ENST00000365507 128 ntBASIC3.82□□□□□ -1.8
CALR3Q96L12 RNU6-376P-201ENST00000384731 106 ntBASIC3.82□□□□□ -1.8
CALR3Q96L12 AL139247.1-201ENST00000422768 325 ntBASIC3.82□□□□□ -1.8
CALR3Q96L12 AL357552.1-201ENST00000445254 415 ntBASIC3.82□□□□□ -1.8
CALR3Q96L12 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.82□□□□□ -1.8
CALR3Q96L12 AL133162.1-201ENST00000463228 453 ntBASIC3.82□□□□□ -1.8
CALR3Q96L12 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.82□□□□□ -1.8
CALR3Q96L12 RNU7-172P-201ENST00000517125 64 ntBASIC3.82□□□□□ -1.8
CALR3Q96L12 Y_RNA.778-201ENST00000620203 90 ntBASIC3.82□□□□□ -1.8
CALR3Q96L12 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CALR3Q96L12 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms