Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SNORA80E-201ENST00000384744 137 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 MIR215-201ENST00000384858 110 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 Y_RNA.595-201ENST00000410403 105 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.57□□□□□ -2
VPS50Q96JG6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.57□□□□□ -2
VPS50Q96JG6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 IPO7P1-201ENST00000442031 636 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 AL731563.1-201ENST00000442202 214 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 IFNA11P-201ENST00000446352 526 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 PCNPP5-201ENST00000452246 481 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 AL139109.1-201ENST00000455491 297 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.57□□□□□ -2
VPS50Q96JG6 RNU1-117P-201ENST00000517041 158 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 AK6P2-201ENST00000549020 471 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 AC026470.2-201ENST00000561492 181 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.57□□□□□ -2
VPS50Q96JG6 Y_RNA.772-201ENST00000606692 102 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 MIR5739-201ENST00000619803 80 ntBASIC2.57□□□□□ -2
VPS50Q96JG6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.57□□□□□ -2
VPS50Q96JG6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS50Q96JG6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS50Q96JG6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS50Q96JG6 RNA5SP125-201ENST00000364843 120 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 Y_RNA.396-201ENST00000383949 103 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 RNU6-505P-201ENST00000384427 107 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
VPS50Q96JG6 MRPL35P1-201ENST00000404272 572 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 MIR1294-201ENST00000408503 142 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 ELOCP21-201ENST00000412558 336 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 AL161788.1-201ENST00000441805 169 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.56□□□□□ -2
VPS50Q96JG6 AC009237.7-201ENST00000447357 229 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 AC007395.1-201ENST00000451333 677 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.56□□□□□ -2
VPS50Q96JG6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.56□□□□□ -2
VPS50Q96JG6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.56□□□□□ -2
VPS50Q96JG6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.56□□□□□ -2
VPS50Q96JG6 MIR4672-201ENST00000583126 81 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 MIR1248-201ENST00000629190 106 ntBASIC2.56□□□□□ -2
VPS50Q96JG6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
VPS50Q96JG6 RNU6-626P-201ENST00000363354 107 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 Y_RNA.193-201ENST00000363979 102 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 SNORA67.2-201ENST00000384300 149 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 MIR144-201ENST00000384886 86 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 MIR95-201ENST00000385072 81 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 MT-TW-201ENST00000387382 68 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 RNA5SP210-201ENST00000391034 120 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 MIR320B2-201ENST00000408479 138 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
VPS50Q96JG6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.55□□□□□ -2
VPS50Q96JG6 UQCRBP2-201ENST00000447827 297 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 AL109933.2-201ENST00000452651 260 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 ATP5EP1-201ENST00000510257 156 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.55□□□□□ -2
VPS50Q96JG6 RNU5F-4P-201ENST00000516581 114 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 AP003733.2-201ENST00000529409 171 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 AP002001.1-203ENST00000534002 267 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 AC121758.2-201ENST00000553271 193 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 AL161670.1-201ENST00000554348 137 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 MIR4300-201ENST00000581016 96 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 MIR3149-201ENST00000584629 83 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.55□□□□□ -2
VPS50Q96JG6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.55□□□□□ -2
VPS50Q96JG6 MIR8062-201ENST00000621515 85 ntBASIC2.55□□□□□ -2
VPS50Q96JG6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS50Q96JG6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.54□□□□□ -2
VPS50Q96JG6 RNU6-545P-201ENST00000362681 104 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 Y_RNA.376-201ENST00000365638 108 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 RNU6-20P-201ENST00000384106 107 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 RNU6-472P-201ENST00000384299 107 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 SNORD115-46-201ENST00000390982 71 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 RNU2-32P-201ENST00000411193 191 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 AC005002.2-201ENST00000438228 269 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 CKS1BP2-201ENST00000497342 240 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 AC025465.3-201ENST00000510570 311 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
VPS50Q96JG6 RN7SKP132-201ENST00000516001 208 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 RNU6-344P-201ENST00000516635 111 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 RNU6-570P-201ENST00000517051 105 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 IGLV3-17-201ENST00000519099 244 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.54□□□□□ -2
VPS50Q96JG6 AC018448.1-201ENST00000552843 316 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 AC233702.2-202ENST00000562547 291 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.54□□□□□ -2
VPS50Q96JG6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 MIR376A1-201ENST00000616574 68 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.54□□□□□ -2
VPS50Q96JG6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.54□□□□□ -2
VPS50Q96JG6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.54□□□□□ -2
VPS50Q96JG6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VPS50Q96JG6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
VPS50Q96JG6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VPS50Q96JG6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
VPS50Q96JG6 snoU2_19.2-201ENST00000363024 80 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 RNU6-743P-201ENST00000364151 106 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 RNU6-234P-201ENST00000365229 104 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 Y_RNA.483-201ENST00000384380 101 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 AC003685.2-201ENST00000422795 395 ntBASIC2.53□□□□□ -2
VPS50Q96JG6 CBX3P6-201ENST00000430257 527 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms