Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNORD115-38-201ENST00000365037 82 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 Y_RNA.553-201ENST00000384670 102 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 MIR499A-201ENST00000384903 122 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 RNA5SP109-201ENST00000391010 116 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 AL356776.1-201ENST00000406574 447 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 MIR1287-201ENST00000408492 90 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 RNU4-55P-201ENST00000410731 137 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 MTCO1P19-201ENST00000443487 500 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 AC074290.1-201ENST00000448883 135 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 SRRM1P2-201ENST00000464531 1192 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 RPL23AP75-201ENST00000491601 451 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 RNA5SP401-201ENST00000515920 127 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 RNU6-835P-201ENST00000516974 104 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 RNU6-165P-201ENST00000517170 99 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 AC137590.2-201ENST00000619709 240 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 snoZ196.1-201ENST00000625269 89 ntBASIC0.99□□□□□ -2.25
ECHDC3Q96DC8 RNU1-124P-201ENST00000363861 145 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 RNU4-66P-201ENST00000365199 138 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 MIR487A-201ENST00000385009 80 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 EIF4E2P1-201ENST00000393781 255 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 RNU6-648P-201ENST00000410190 107 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 RNU6-57P-201ENST00000411348 103 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 RNU7-34P-201ENST00000459394 64 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 MTCO1P29-201ENST00000496868 288 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 RN7SKP88-201ENST00000516847 250 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 AC007834.2-201ENST00000536310 343 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 AL929325.1-201ENST00000603096 117 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 AC022217.4-201ENST00000604389 163 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 AL133215.3-201ENST00000609801 448 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 AC063944.3-201ENST00000609969 533 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 7SK.8-201ENST00000612110 250 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 MIR6504-201ENST00000613520 61 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 7SK.11-201ENST00000615477 250 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 7SK.13-201ENST00000622040 250 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 AC027335.2-201ENST00000624030 375 ntBASIC0.98□□□□□ -2.25
ECHDC3Q96DC8 SNORD114-27-201ENST00000363766 70 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 Y_RNA.224-201ENST00000364308 111 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 Y_RNA.226-201ENST00000364337 114 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 RNU6-522P-201ENST00000364497 107 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 SNORA69-201ENST00000383895 132 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 RNU6-950P-201ENST00000384651 107 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 RNU6-1031P-201ENST00000384773 107 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 SNORA12.1-201ENST00000390873 148 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 TPT1P7-201ENST00000458300 517 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 RPL39P38-201ENST00000467018 153 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 RNU7-128P-201ENST00000517247 62 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 MTND1P5-201ENST00000517906 940 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 MTND1P35-201ENST00000526739 508 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 AC008088.1-201ENST00000580993 280 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 AC119751.7-201ENST00000600494 245 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 AL078596.1-201ENST00000624856 447 ntBASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.97□□□□□ -2.25
ECHDC3Q96DC8 SNORD50.1-201ENST00000362987 71 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 SNORD113-7-201ENST00000363762 77 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 RNU6-1322P-201ENST00000364309 107 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 RNA5SP259-201ENST00000365541 109 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 RNU6-245P-201ENST00000384020 107 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 RNU6-214P-201ENST00000384130 107 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 AC008134.1-201ENST00000420943 193 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 MRPS10P2-201ENST00000431226 381 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 DYNLT3P2-201ENST00000442517 295 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 MTND3P16-201ENST00000452205 344 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 AC079354.2-201ENST00000453523 154 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 ZNF204P-201ENST00000416749 2397 ntBASIC0.96□□□□□ -2.26
ECHDC3Q96DC8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 Y_RNA.77-201ENST00000362962 107 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 RNU6-1240P-201ENST00000365155 104 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 SNORA25-201ENST00000384384 134 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 SNORD37.1-201ENST00000390968 65 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 MIR1253-201ENST00000408273 105 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 NDUFB4P10-201ENST00000452541 359 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 RNA5SP54-201ENST00000516951 92 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 OSBPL9P5-201ENST00000542581 171 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 AC146944.4-201ENST00000602697 718 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 AC136443.5-201ENST00000603741 370 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 BX284668.6-201ENST00000606899 438 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 AC097065.2-201ENST00000608159 533 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 AC073534.2-201ENST00000620377 381 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 AC068792.1-201ENST00000621354 417 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.95□□□□□ -2.26
ECHDC3Q96DC8 AL391516.1-201ENST00000554380 2449 ntBASIC0.94□□□□□ -2.26
ECHDC3Q96DC8 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
ECHDC3Q96DC8 Y_RNA.191-201ENST00000363972 113 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms