Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU6-1305P-201ENST00000364353 104 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 SNORA72.2-201ENST00000365028 127 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 MIR10B-201ENST00000385011 110 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 MIR549A-201ENST00000385268 96 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 SNORA40.18-201ENST00000391200 128 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 AC007098.1-201ENST00000420122 367 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 AC069257.2-201ENST00000441819 155 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 AC107399.1-201ENST00000451226 265 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 RNU7-57P-201ENST00000459540 60 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 TRBV12-1-201ENST00000479785 344 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 RPS29P21-201ENST00000496272 170 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 RPS29P11-201ENST00000496507 171 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 MIR5094-201ENST00000578766 85 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 AC100812.1-201ENST00000607622 580 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 AC022306.2-201ENST00000617563 647 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 snoZ196.1-201ENST00000625269 89 ntBASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
RPUSD4Q96CM3 RNU6-862P-201ENST00000362804 105 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 Y_RNA.88-201ENST00000363029 99 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 Y_RNA.405-201ENST00000383979 100 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 Y_RNA.451-201ENST00000384200 100 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 RNU6-793P-201ENST00000384233 104 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 Y_RNA.524-201ENST00000384564 100 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 Y_RNA.561-201ENST00000384694 100 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 MIR520A-201ENST00000384862 85 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 MIR30A-201ENST00000385092 71 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 RNU6-360P-201ENST00000390944 104 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 MIR548F5-201ENST00000408421 86 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 Y_RNA.594-201ENST00000410373 140 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 AC008134.1-201ENST00000420943 193 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 RPS3AP52-201ENST00000435639 297 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 RNA5SP57-201ENST00000459463 123 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 RPL23AP63-201ENST00000498752 471 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 RNU6-1114P-201ENST00000516022 107 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 SNORA25.14-201ENST00000516481 132 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 Y_RNA.708-201ENST00000516950 96 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 AC024995.1-201ENST00000523014 93 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 CBX3P8-201ENST00000532412 525 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 AK6P2-201ENST00000549020 471 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 AL160236.1-201ENST00000556317 195 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 AC005014.2-201ENST00000607795 599 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 AC084768.2-201ENST00000622736 221 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 CASC19-280ENST00000642102 1351 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 AC010615.1-201ENST00000594254 1764 ntBASIC1.28□□□□□ -2.2
RPUSD4Q96CM3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AL161722.3-201ENST00000605789 2983 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 RNU1-96P-201ENST00000364163 162 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 SNORA70B-201ENST00000384210 135 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 MT-TL1-201ENST00000386347 75 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 MIR1185-2-201ENST00000408687 86 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 RNU6-1050P-201ENST00000410388 107 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 RPL37P10-201ENST00000412884 288 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AC016909.1-201ENST00000415916 166 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 MTND3P23-201ENST00000431980 347 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 HMGN2P34-201ENST00000437647 269 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 HMGB1P18-201ENST00000438801 619 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 RBMX2P4-201ENST00000441256 376 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AC016717.1-201ENST00000448918 286 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 HSPE1P24-201ENST00000450782 238 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AP000870.1-201ENST00000472927 406 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AC091179.3-201ENST00000474761 144 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AC023790.1-201ENST00000482174 347 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AC025465.3-201ENST00000510570 311 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 Y_RNA.670-201ENST00000516255 105 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 RNA5SP481-201ENST00000516814 122 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 RNU7-30P-201ENST00000516835 62 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AC025647.1-201ENST00000517879 253 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 CYCSP23-201ENST00000519781 313 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 AC013412.1-201ENST00000610687 192 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.27□□□□□ -2.21
RPUSD4Q96CM3 RNU6-281P-201ENST00000384212 103 ntBASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 RNU6-541P-201ENST00000384709 110 ntBASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 RPL21P111-201ENST00000418453 477 ntBASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 EBAG9P1-201ENST00000418955 543 ntBASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 PDCL2P1-201ENST00000419302 352 ntBASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 MTCO3P29-201ENST00000432119 779 ntBASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 RPL31P58-201ENST00000469001 379 ntBASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 RPL26P26-201ENST00000480251 434 ntBASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 Y_RNA.706-201ENST00000516933 99 ntBASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 AC084364.2-201ENST00000546924 395 ntBASIC1.26□□□□□ -2.21
RPUSD4Q96CM3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms