Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 JTBP1-201ENST00000441314 247 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 AC091179.3-201ENST00000474761 144 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 RNU6-1114P-201ENST00000516022 107 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 CBX3P8-201ENST00000532412 525 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 UBL5P4-201ENST00000562584 236 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 DEFB122-202ENST00000569013 197 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 AC016925.2-201ENST00000605108 242 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 AL590808.1-201ENST00000618696 141 ntBASIC1.73□□□□□ -2.13
VPS33AQ96AX1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
VPS33AQ96AX1 Y_RNA.179-201ENST00000363844 90 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 RNU6-1240P-201ENST00000365155 104 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 MIR548B-201ENST00000385247 97 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 AL079342.1-201ENST00000401460 267 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 MIR548F5-201ENST00000408421 86 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 MIR1185-2-201ENST00000408687 86 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS33AQ96AX1 AL445685.2-201ENST00000422551 342 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 DPH3P2-201ENST00000422618 250 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 MTND3P23-201ENST00000431980 347 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 RPS3AP52-201ENST00000435639 297 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VPS33AQ96AX1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS33AQ96AX1 AC107399.1-201ENST00000451226 265 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 snoU13.9-201ENST00000458927 103 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 MTND4LP26-201ENST00000518144 282 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 AL121579.1-201ENST00000555129 305 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 MIR5701-3-201ENST00000578890 82 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 MIR5701-1-201ENST00000585138 82 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 AC084782.3-201ENST00000612282 578 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 MIR5701-2-201ENST00000615634 82 ntBASIC1.72□□□□□ -2.13
VPS33AQ96AX1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS33AQ96AX1 ZNF355P-201ENST00000427301 3216 ntBASIC1.71□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.287-201ENST00000364853 94 ntBASIC1.71□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.339-201ENST00000365325 102 ntBASIC1.71□□□□□ -2.14
VPS33AQ96AX1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
VPS33AQ96AX1 USP9YP16-201ENST00000430287 407 ntBASIC1.71□□□□□ -2.14
VPS33AQ96AX1 USP9YP23-201ENST00000455085 407 ntBASIC1.71□□□□□ -2.14
VPS33AQ96AX1 AC107393.1-201ENST00000512403 346 ntBASIC1.71□□□□□ -2.14
VPS33AQ96AX1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS33AQ96AX1 MIR4435-1-201ENST00000582552 80 ntBASIC1.71□□□□□ -2.14
VPS33AQ96AX1 AL355802.3-201ENST00000607571 545 ntBASIC1.71□□□□□ -2.14
VPS33AQ96AX1 AC010999.1-201ENST00000611856 324 ntBASIC1.71□□□□□ -2.14
VPS33AQ96AX1 SNORD87-201ENST00000364849 89 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.415-201ENST00000384012 112 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.482-201ENST00000384377 111 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 RNU6-417P-201ENST00000384712 107 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.594-201ENST00000410373 140 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 AL445305.1-201ENST00000432577 575 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 AC005908.1-201ENST00000468701 347 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.7□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.708-201ENST00000516950 96 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 SNORA77B-201ENST00000578179 125 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS33AQ96AX1 MIR4422-201ENST00000581938 83 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 MIR6852-201ENST00000621699 66 ntBASIC1.7□□□□□ -2.14
VPS33AQ96AX1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS33AQ96AX1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS33AQ96AX1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VPS33AQ96AX1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.69□□□□□ -2.14
VPS33AQ96AX1 RNU6-727P-201ENST00000363592 107 ntBASIC1.69□□□□□ -2.14
VPS33AQ96AX1 RNU6-601P-201ENST00000384540 107 ntBASIC1.69□□□□□ -2.14
VPS33AQ96AX1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VPS33AQ96AX1 RNU6-1050P-201ENST00000410388 107 ntBASIC1.69□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.619-201ENST00000410951 90 ntBASIC1.69□□□□□ -2.14
VPS33AQ96AX1 RNA5SP508-201ENST00000411327 119 ntBASIC1.69□□□□□ -2.14
VPS33AQ96AX1 snoU13.27-201ENST00000459278 104 ntBASIC1.69□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.69□□□□□ -2.14
VPS33AQ96AX1 AK6P2-201ENST00000549020 471 ntBASIC1.69□□□□□ -2.14
VPS33AQ96AX1 MIR5695-201ENST00000579717 85 ntBASIC1.69□□□□□ -2.14
VPS33AQ96AX1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VPS33AQ96AX1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
VPS33AQ96AX1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 RNU6-767P-201ENST00000384132 107 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 MIR9-3-201ENST00000385084 90 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 RNU6-700P-201ENST00000391043 107 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 AC019129.1-201ENST00000403786 261 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 RPL37P10-201ENST00000412884 288 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS33AQ96AX1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS33AQ96AX1 AC116353.2-201ENST00000505332 712 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 AC105029.1-201ENST00000520250 669 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 AP000889.1-201ENST00000530968 660 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 AC005668.1-201ENST00000571142 476 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 AC090617.3-201ENST00000573670 475 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS33AQ96AX1 AC022432.1-201ENST00000595739 310 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 AC005014.2-201ENST00000607795 599 ntBASIC1.68□□□□□ -2.14
VPS33AQ96AX1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS33AQ96AX1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS33AQ96AX1 MIR126-201ENST00000362291 85 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.2-201ENST00000362330 96 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.48-201ENST00000362710 103 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 SNORA33-201ENST00000363664 130 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.166-201ENST00000363730 102 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 Y_RNA.279-201ENST00000364763 95 ntBASIC1.67□□□□□ -2.14
VPS33AQ96AX1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms